DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18478 and zgc:123217

DIOPT Version :9

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001032480.1 Gene:zgc:123217 / 641414 ZFINID:ZDB-GENE-051113-188 Length:326 Species:Danio rerio


Alignment Length:295 Identity:76/295 - (25%)
Similarity:127/295 - (43%) Gaps:41/295 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LIVALFVLGVAENVENLQQIEELKCGYGNPDAVKVQFNVTEGQAKPA-EFPWTIAVIHNRSLVGG 70
            |:::..|:.::....|.|...|  ||     ...:...:..|...|| .:||.:::.:|...:.|
Zfish     6 LLLSSAVIMLSTQDSNAQTTYE--CG-----VAPLNTRIVGGTDAPAGSWPWQVSIHYNNRHICG 63

  Fly    71 GSLITPDIVLTAAHRIFNKDVEDIVVSAGEWEYGSALEKYPFEEAFVLKMVI-HKSFNYQRGANN 134
            |:||....|:||||.|.|.::....:..|.....:::.. |.|....::.:| |.|||.....|:
Zfish    64 GTLIHSQWVMTAAHCIINTNINVWTLYLGRQTQSTSVAN-PNEVKVGIQSIIDHPSFNNSLLNND 127

  Fly   135 LALLFLDREFPLTYKINTICLPTQKRSL-SSTRCIVAGWGKYQFSDTHYG--------GVLKKID 190
            ::|:.|.:....:..|..|||....... :.|.|...|||       :.|        ..|:::.
Zfish   128 ISLMKLSQPVNFSLYIRPICLAANNSIFYNGTSCWATGWG-------NIGKDQALPAPQTLQQVQ 185

  Fly   191 LPIVPRHICQDQLRKTRLGQNYTLPRGLICAGGEKDNDACTGDGGGALFCPMTEDPKQ---FEQI 252
            :|:|...:|..:....   .|.|:...:||| |:.:...|.||.||...|      ||   :.|.
Zfish   186 IPVVANSLCSTEYESV---NNATITPQMICA-GKANKGTCQGDSGGPFQC------KQGSVWIQA 240

  Fly   253 GIVNWG--VGCKEKNVPATYTDVFEFKPWIVQQIK 285
            ||.::|  .||.....|..|:.|.||:.||...::
Zfish   241 GITSYGTSAGCAVGAYPDVYSRVSEFQSWIKMNVQ 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..283 CDD:238113 68/248 (27%)
Tryp_SPc 50..280 CDD:214473 66/245 (27%)
zgc:123217NP_001032480.1 Tryp_SPc 36..270 CDD:214473 67/251 (27%)
Tryp_SPc 37..273 CDD:238113 69/253 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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