DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18478 and CG11841

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_651661.1 Gene:CG11841 / 43430 FlyBaseID:FBgn0039628 Length:319 Species:Drosophila melanogaster


Alignment Length:249 Identity:72/249 - (28%)
Similarity:109/249 - (43%) Gaps:34/249 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AKPAEFPWTIAVIHNRS-----LVGGGSLITPDIVLTAAHRIFNKDVEDIVVSAGEWEYGSALEK 109
            |:|.|||:...:.|.::     ...||:||:..:||||||..|::..|..||..||.|:.:..:.
  Fly    78 AEPKEFPFAARLGHRKTNNEIKWFCGGTLISNRLVLTAAHCFFSEHGEVNVVRLGELEFDTDTDD 142

  Fly   110 YPFEEAFVLKMVIHKSFNYQRGANNLALLFLDREFPLTYKINTICLP----TQKRSLSSTRCIVA 170
            ...|:..||.:..|..|...:..|::.::.||||.......:..|||    .|..|.     |..
  Fly   143 AEPEDFGVLALKAHPGFENPQLYNDIGIVQLDREVKFNRYKHPACLPFDDGEQHESF-----IAI 202

  Fly   171 GWGKYQFSDTHYGGVLKKIDLPIVPRHICQDQLRKTR----LGQNYTLPRGL-----ICAGGEKD 226
            |||:.:|:......:||           .|.|..|.|    :..|..||.|.     :|.|...:
  Fly   203 GWGQKKFAQKESKKLLK-----------VQLQGYKDRCVSSVDANDELPNGYEPKSQLCIGSRDN 256

  Fly   227 NDACTGDGGGALFCPMTEDPKQFEQIGIVNWGVGCKEKNVPATYTDVFEFKPWI 280
            .|.|.||.||.:.....:....:..:||.:.|:.|...::|:.||.|..|..||
  Fly   257 KDTCNGDSGGPVLAYHKDLACMYHVMGITSAGITCSTPDIPSAYTRVHYFLNWI 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 70/247 (28%)
CG11841NP_651661.1 Tryp_SPc 72..311 CDD:238113 72/249 (29%)

Return to query results.
Submit another query.