DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18478 and CG13318

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_649831.1 Gene:CG13318 / 41048 FlyBaseID:FBgn0037627 Length:405 Species:Drosophila melanogaster


Alignment Length:238 Identity:95/238 - (39%)
Similarity:136/238 - (57%) Gaps:10/238 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GQAKPAEFPWTIAVIHNRSL-VGGGSLITPDIVLTAAHRIFNKDVEDIVVSAGEWEYGSALEKYP 111
            |||....:||..|::....: :|||:|||...||||||:::|..:....|..|||:..|..|..|
  Fly   167 GQASFGAYPWQAALLTTADVYLGGGALITAQHVLTAAHKVYNLGLTYFKVRLGEWDAASTSEPIP 231

  Fly   112 FEEAFVLKMVIHKSFNYQRGANNLALLFLDREFPLTYK--INTICLPTQKRSLSSTRCIVAGWGK 174
            .::.::..:.::.|||.....|::|:|.|.....||.|  :.|:||||  .|....||.||||||
  Fly   232 AQDVYISNVYVNPSFNPNNLQNDVAILKLSTPVSLTSKSTVGTVCLPT--TSFVGQRCWVAGWGK 294

  Fly   175 YQFSDT-HYGGVLKKIDLPIVPRHICQDQLRKTRLGQNYTL-PRGLICAGGEKDNDACTGDGGGA 237
            ..|..| .|..:.:::|:|::|...||..|:.||||.::.| |...||||||...||||||||..
  Fly   295 NDFGATGAYQAIERQVDVPLIPNANCQAALQATRLGSSFVLSPTSFICAGGEAGKDACTGDGGSP 359

  Fly   238 LFCPMTEDPKQFEQIGIVNWGVGCKEKNVPATYTDVFEFKPWI 280
            |.|  |.:...: .:|:|.||:||.:..||..|.:|..:.|||
  Fly   360 LVC--TSNGVWY-VVGLVAWGIGCAQAGVPGVYVNVGTYLPWI 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 91/234 (39%)
CG13318NP_649831.1 CLIP_1 <91..145 CDD:465709
Tryp_SPc 169..402 CDD:238113 93/236 (39%)
Blue background indicates that the domain is not in the aligned region.

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