DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18478 and CG6462

DIOPT Version :9

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_648011.1 Gene:CG6462 / 38681 FlyBaseID:FBgn0035663 Length:319 Species:Drosophila melanogaster


Alignment Length:288 Identity:81/288 - (28%)
Similarity:116/288 - (40%) Gaps:78/288 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GNPDAVKVQFNVTEGQ-AKPAEFPWTIAVIHNRS---LVG-GGSLITPDIVLTAAH--------R 85
            ||..|. |:..:..|: |....||:.:.::...|   ||. ||||||...||||||        :
  Fly    67 GNQTAA-VRTRIAGGELATRGMFPYQVGLVIQLSGADLVKCGGSLITLQFVLTAAHCLTDAIAAK 130

  Fly    86 IFN-----KDVEDIVVSAGEWEYGSALEKYPFEEAFVLKMVIHKSF----NYQ--RGANNLALLF 139
            |:.     .||||.|                 ||.    .|.|:.|    :|.  .|.::|||:.
  Fly   131 IYTGATVFADVEDSV-----------------EEL----QVTHRDFIIYPDYLGFGGYSDLALIR 174

  Fly   140 LDREFPLTYKINTICLPTQ---KRSLSSTRCIVAGWGKYQFSDTHYGGVLKKIDLPIV--PRHIC 199
            |.|:...:.::..|.|..:   :..|......::|||....|......:|:.:|..::  .|.||
  Fly   175 LPRKVRTSEQVQPIELAGEFMHQNFLVGKVVTLSGWGYLGDSTDKRTRLLQYLDAEVIDQERCIC 239

  Fly   200 QDQLRKTRLGQNYTLPRGLI------CAGGEKDNDACTGDGGGALFCPMTEDPKQFEQ-IGIVNW 257
                        |.|| ||:      |..|.....||.||.||    |:....:.... ||:.::
  Fly   240 ------------YFLP-GLVSQRRHLCTDGSNGRGACNGDSGG----PVVYHWRNVSYLIGVTSF 287

  Fly   258 G--VGCKEKNVPATYTDVFEFKPWIVQQ 283
            |  .|| |...|..||.:..:.|||.||
  Fly   288 GSAEGC-EVGGPTVYTRITAYLPWIRQQ 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..283 CDD:238113 74/269 (28%)
Tryp_SPc 50..280 CDD:214473 72/266 (27%)
CG6462NP_648011.1 Tryp_SPc 76..311 CDD:214473 73/273 (27%)
Tryp_SPc 77..314 CDD:238113 75/275 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457590
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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