DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18478 and flz

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001137622.1 Gene:flz / 35902 FlyBaseID:FBgn0286782 Length:1693 Species:Drosophila melanogaster


Alignment Length:240 Identity:68/240 - (28%)
Similarity:110/240 - (45%) Gaps:27/240 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 FPWTIAVIHNRSLVG-------GGSLITPDIVLTAAHRIFNKDVEDIVVSAGEWEYGSALEKYPF 112
            :||.: ::...:.:|       ||.|||...|:|||| .....:..:|...||::....||....
  Fly  1460 YPWQV-LVRESTWLGLFTKNKCGGVLITSRYVITAAH-CQPGFLASLVAVMGEFDISGDLESKRS 1522

  Fly   113 EEAFVLKMVIHKSFNYQRGANNLALLFLDREFPLTYKINTICLPTQKRSLSSTRCIVAGWGKYQF 177
            ....|.::::|:.::.....|:||||.||........|..||:|......:.....|.|||:.: 
  Fly  1523 VTKNVKRVIVHRQYDPATFENDLALLELDSPVQFDTHIVPICMPNDVADFTGRMATVTGWGRLK- 1586

  Fly   178 SDTHYGG----VLKKIDLPIVPRHICQDQLRKTRLGQNYTLPRGLICAG---GEKDNDACTGDGG 235
                |||    ||:::.:||:...:||:.....  |.|..:....:|||   |:|  |:|.||.|
  Fly  1587 ----YGGGVPSVLQEVQVPIIENSVCQEMFHTA--GHNKKILTSFLCAGYANGQK--DSCEGDSG 1643

  Fly   236 GALFCPMTEDPKQFEQIGIVNWGVGCKEKNVPATYTDVFEFKPWI 280
            |.|.  :.....::|..|.|:.|:.|....:|..|.....:|||:
  Fly  1644 GPLV--LQRPDGRYELAGTVSHGIKCAAPYLPGVYMRTTFYKPWL 1686

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 67/238 (28%)
flzNP_001137622.1 PRK11633 <365..>439 CDD:236940
PRK10263 <547..>1005 CDD:236669
PHA03247 <792..1096 CDD:223021
Tryp_SPc 1449..1689 CDD:238113 68/240 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.