DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18478 and Jon44E

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_724699.1 Gene:Jon44E / 35853 FlyBaseID:FBgn0001285 Length:271 Species:Drosophila melanogaster


Alignment Length:266 Identity:65/266 - (24%)
Similarity:109/266 - (40%) Gaps:55/266 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PDAVKVQFNVTEG-QAKPAEFPWTIAVIHNRSLVG---GGSLITPDIVLTAAHRIFNKDVEDIVV 96
            |.|.|::..:|.| .|...:.|:.:.:..|..  |   |||:|....||||||  .......:::
  Fly    32 PRAGKIEGRITNGYPAYEGKIPYIVGLSFNDG--GYWCGGSIIDHTWVLTAAH--CTNSANHVLI 92

  Fly    97 SAG----------EWEYGSALEKYPFEEAFVLKMVIHKSFNYQRGANNLALLFLDREFPLTYKIN 151
            ..|          .|...|.:.::|....|:              .|::||:.:. .......:|
  Fly    93 YFGASFRHEAQYTHWVSRSDMIQHPDWNDFL--------------NNDIALIRIP-HVDFWSLVN 142

  Fly   152 TICLPT---QKRSLSSTRCIVAGWGKYQFSDTHYG--GVLKKIDLPIVPRHICQDQLRKTRLGQN 211
            .:.||:   :..|.|....:.:|||   .:|.:.|  ..|..:|:.|:..:.|::.     .|.|
  Fly   143 KVELPSYNDRYNSYSGWWAVASGWG---LTDNNSGMSNYLNCVDVQIIDNNDCRNY-----YGSN 199

  Fly   212 YTLPRGLICAGGEKDNDACTGDGGGALFCPMTEDPKQFEQIGIVNW--GVGCKEKNVPATYTDVF 274
            | :....||...:....:|:||.||.|   :..|..:.  :|||::  |.||.... ||.:|.|.
  Fly   200 Y-ITDNTICINTDGGKSSCSGDSGGPL---VLHDNNRI--VGIVSFGSGEGCTAGR-PAGFTRVT 257

  Fly   275 EFKPWI 280
            .:..||
  Fly   258 GYLDWI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 58/249 (23%)
Jon44ENP_724699.1 Tryp_SPc 41..266 CDD:238113 62/257 (24%)

Return to query results.
Submit another query.