DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18478 and Tpsb2

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_062053.2 Gene:Tpsb2 / 29268 RGDID:3065 Length:274 Species:Rattus norvegicus


Alignment Length:268 Identity:79/268 - (29%)
Similarity:124/268 - (46%) Gaps:33/268 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PDAVKVQFNVTEG-QAKPAEFPWTIAVIHNRSL---VGGGSLITPDIVLTAAHRIFNKDVEDIVV 96
            |..||.:..:..| :|..:::||.:::....|.   ..|||||.|..||||||.:      .:.:
  Rat    21 PCPVKQRVGIVGGREASESKWPWQVSLRFKFSFWMHFCGGSLIHPQWVLTAAHCV------GLHI 79

  Fly    97 SAGEWEYGSALEKYPF---EEAFVLKMVIHKSFNYQRGANNLALLFLDREFPLTYKINTICLPTQ 158
            .:.|.......|:|.:   :...|.:.|:|..:.......::|||.|:....::..|:...||..
  Rat    80 KSPELFRVQLREQYLYYADQLLTVNRTVVHPHYYTVEDGADIALLELENPVNVSTHIHPTSLPPA 144

  Fly   159 KRSL-SSTRCIVAGWGKYQFSD---THYGGVLKKIDLPIVPRHICQDQLRKTRLGQNYT------ 213
            ..:. |.|.|.|.|||.....:   ..|  .||::.:|||...:|.   ||...|. ||      
  Rat   145 SETFPSGTSCWVTGWGDIDSDEPLLPPY--PLKQVKVPIVENSLCD---RKYHTGL-YTGDDVPI 203

  Fly   214 LPRGLICAGGEKDNDACTGDGGGALFCPMTEDPKQFEQIGIVNWGVGCKEKNVPATYTDVFEFKP 278
            :..|::|||..: :|:|.||.||.|.|.:   ...:.|.|:|:||.||.|.|.|..||.|..:..
  Rat   204 VQDGMLCAGNTR-SDSCQGDSGGPLVCKV---KGTWLQAGVVSWGEGCAEANRPGIYTRVTYYLD 264

  Fly   279 WIVQQIKE 286
            ||.:.:.:
  Rat   265 WIHRYVPQ 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 73/245 (30%)
Tpsb2NP_062053.2 Tryp_SPc 30..268 CDD:238113 76/253 (30%)

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