DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18478 and CG30088

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_725488.3 Gene:CG30088 / 246447 FlyBaseID:FBgn0050088 Length:281 Species:Drosophila melanogaster


Alignment Length:281 Identity:76/281 - (27%)
Similarity:116/281 - (41%) Gaps:54/281 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CGYGNPDAVKVQFNVT-------EGQAKPAEFPWTIAVIHNRSLVGGGSLITPDIVLTAAH--RI 86
            ||      |..:.||.       |...|.|  |:...:.::..:..||::|:...:|||||  |.
  Fly    33 CG------VSYESNVATRIVRGKEAMLKSA--PFMAYLYYSSEIHCGGTIISSRYILTAAHCMRP 89

  Fly    87 FNKDVEDIVVSAGEWEY--------GSALEKYPFEEAFVLKMVIHKSFNYQRGANNLALLFLDRE 143
            :.|      |..||.:.        ||.  ..|.||..::....:|.|: :..||::|||.|.|.
  Fly    90 YLK------VRLGEHDITRNPDCQGGSC--SPPAEEFDIVLATKYKRFD-RFLANDIALLKLSRN 145

  Fly   144 FPLTYKINTICLPTQKRSLSSTRCIVA-GWGKYQFSDTHYGGVLKKIDLPIVPRHICQDQLRKTR 207
            ......|..|||.....:..:.....| |||  |....|...||:...|.......|:..|    
  Fly   146 IRFNVHIQPICLILNPAAAPNVHEFQAFGWG--QTETNHSANVLQTTVLTRYDNRHCRSVL---- 204

  Fly   208 LGQNYTLPRGL--ICAGGEKDNDACTGDGGGALFCPMTEDPK-QFEQIGIVNWGVG-CKEKNVPA 268
                 ::|..:  :|.|.: .:|.|:||.||.|...:..|.. ::.|:|||::|.. |:.   |.
  Fly   205 -----SMPITINQLCVGFQ-GSDTCSGDSGGPLVTKVNYDGVWRYLQLGIVSFGDDKCQS---PG 260

  Fly   269 TYTDVFEFKPWIVQQIKENLY 289
            .||.|..:..||...::.|.|
  Fly   261 VYTYVPNYIRWIRYVMQSNGY 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 66/244 (27%)
CG30088NP_725488.3 Tryp_SPc 45..273 CDD:238113 68/253 (27%)

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