DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18478 and Tpsb2

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_034911.3 Gene:Tpsb2 / 17229 MGIID:96942 Length:276 Species:Mus musculus


Alignment Length:279 Identity:78/279 - (27%)
Similarity:127/279 - (45%) Gaps:47/279 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 YGNPDAVKVQFNVTEG-QAKPAEFPWTIAV-------IHNRSLVGGGSLITPDIVLTAAH----- 84
            |..|.....:..:..| :|..:::||.:::       ||    ..|||||.|..||||||     
Mouse    20 YSAPRPANQRVGIVGGHEASESKWPWQVSLRFKLNYWIH----FCGGSLIHPQWVLTAAHCVGPH 80

  Fly    85 ----RIFNKDVEDIVVSAGEWEYGSALEKYPFEEAFVLKMVIHKSFNYQRGANNLALLFLDREFP 145
                ::|...:.:..:     .||..|       ..:.::|:|..:....|..::|||.|:....
Mouse    81 IKSPQLFRVQLREQYL-----YYGDQL-------LSLNRIVVHPHYYTAEGGADVALLELEVPVN 133

  Fly   146 LTYKINTICLPTQKRSL-SSTRCIVAGWGKYQFSD---THYGGVLKKIDLPIVPRHICQDQLRKT 206
            ::..::.|.||....:. ..|.|.|.|||.....:   ..|  .||::.:|||...:| |:...|
Mouse   134 VSTHLHPISLPPASETFPPGTSCWVTGWGDIDNDEPLPPPY--PLKQVKVPIVENSLC-DRKYHT 195

  Fly   207 RL--GQNYTLPR-GLICAGGEKDNDACTGDGGGALFCPMTEDPKQFEQIGIVNWGVGCKEKNVPA 268
            .|  |.::.:.. |::|||..: .|:|.||.||.|.|.:   ...:.|.|:|:||.||.:.|.|.
Mouse   196 GLYTGDDFPIVHDGMLCAGNTR-RDSCQGDSGGPLVCKV---KGTWLQAGVVSWGEGCAQPNKPG 256

  Fly   269 TYTDVFEFKPWIVQQIKEN 287
            .||.|..:..||.:.:.|:
Mouse   257 IYTRVTYYLDWIHRYVPEH 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 72/252 (29%)
Tpsb2NP_034911.3 Tryp_SPc 32..270 CDD:238113 75/260 (29%)

Return to query results.
Submit another query.