DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18478 and LOC1271650

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_310506.4 Gene:LOC1271650 / 1271650 VectorBaseID:AGAMI1_014914 Length:380 Species:Anopheles gambiae


Alignment Length:308 Identity:81/308 - (26%)
Similarity:129/308 - (41%) Gaps:60/308 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VAENVENLQQIEELKCGYGNPDAVKVQFNVTEGQAKPAEFPWTIAVIH---NRSLVG-------G 70
            ||:.: :::|.|:...|.|..|.:   ||....|.  .|||:..|:.:   |.:..|       |
Mosquito   101 VAKRI-SVRQCEQFPNGTGLADHI---FNGVAAQF--GEFPYMAALGYGAPNGTEAGLPSLFRCG 159

  Fly    71 GSLITPDIVLTAAHRIFNKDVEDIVVSAGEWEYGSALEKYPFE------EAFVLKMVIHKSFNYQ 129
            .|||:...:|||||.:..:.|         :.....||..|..      :..:.:...|..::..
Mosquito   160 ASLISSRFLLTAAHCLRERPV---------FARLGVLELQPARTVDEPLDIAIRQATPHPDYHAV 215

  Fly   130 RGANNLALLFLDR----EFPLTYKINTICLPTQK-----RSLSSTRCIVAGWGKYQFSDTHYGGV 185
            ...|::|||.|..    ::|.   :..:||.|..     .:|:.....|.|||..|..||.....
Mosquito   216 TYQNDIALLELAEPVTGDWPF---VEPVCLYTNATGGGLEALAGQPLSVQGWGTQQPGDTEPAAR 277

  Fly   186 LKKIDLPIVPRHICQDQLRKTRLGQNYT-LPRGLICAGGEKDN-----DACTGDGGGALFCPMTE 244
            |.|.::.:|.|..|...:.:||  :|.| |..|.:||.|..:.     |.|.||.||.|  .:..
Mosquito   278 LMKANVSLVERDACAASIPRTR--RNPTGLHPGQLCALGRNEQNETVADTCPGDSGGPL--ALNV 338

  Fly   245 DPKQFEQIGIVNWGVGCKEKNVPATYTDVFEFKPWIVQQIKENLYTPD 292
            |.:.: .:||.:.|..|... :|..||:|..:..|:     |::..||
Mosquito   339 DGRHY-LVGITSSGYSCGSP-IPGIYTEVARYLDWV-----ESIVWPD 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 67/260 (26%)
LOC1271650XP_310506.4 CLIP 45..89 CDD:197829
Tryp_SPc 123..375 CDD:238113 72/279 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.