DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18477 and snk

DIOPT Version :10

Sequence 1:NP_609763.1 Gene:CG18477 / 34922 FlyBaseID:FBgn0028864 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster


Alignment Length:372 Identity:96/372 - (25%)
Similarity:161/372 - (43%) Gaps:69/372 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GQNAELNQS----------CGASNEHQ---CVPRHMC-KVKIEFRM------AMTYRNLGCVSTA 68
            |.:||:..|          |..|.:.:   |:..:.| .|..|:|:      ..|:||...|   
  Fly    74 GDDAEVRTSVSEGLHEGAFCRRSFDGRSGYCILAYQCLHVIREYRVHGTRIDICTHRNNVPV--- 135

  Fly    69 ICCPKNLIIKEPRLIINEPITDPQCGFVNS---------KGVTFSFREEDTGL--------AQEA 116
            ||||  |..|.   ::.:.|:..:|...|:         .|.|||.::....:        .:..
  Fly   136 ICCP--LADKH---VLAQRISATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHG 195

  Fly   117 EVPWMVALLDARTS-------SYVAGGALIAPHVVITARQRTENMTASQLVVRAG--EWDFSTKT 172
            ..|.|.||...:.|       .:..||||::...|:||.....:.:....:||.|  :.:.::.|
  Fly   196 LFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSAT 260

  Fly   173 EQLPSVDVPIRSIVRHPGFNLENGANNVALVFLRRSLTSSRHINPICMPSAPKNFDFSRCIFTGW 237
            :|    |:.|..||.||.:......:::||:.|.|.:..|..:.|.|:...|: ......:..||
  Fly   261 QQ----DIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPE-LQIPTVVAAGW 320

  Fly   238 GKNSFDDPSYMNVLKKISLPVVQRRTCEQQLRLYYGNDFELDNSLM----CAGGEP-GKDSCEGD 297
            |:..|.. :..|.|:::.|.||.:.||:|    .|..:..|...::    |||..| |:|:|:||
  Fly   321 GRTEFLG-AKSNALRQVDLDVVPQMTCKQ----IYRKERRLPRGIIEGQFCAGYLPGGRDTCQGD 380

  Fly   298 GGSPLACAIKDNPQRYELAGIVNFGVDCGLPGVPAVYTNVANVIEWI 344
            .|.|:...:.:......:.||.:||..|..|..|.|||.:.:.::||
  Fly   381 SGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18477NP_609763.1 Tryp_SPc 113..344 CDD:214473 66/244 (27%)
snkNP_524338.2 CLIP 93..139 CDD:197829 13/48 (27%)
Tryp_SPc 186..430 CDD:238113 68/252 (27%)

Return to query results.
Submit another query.