DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18477 and teq

DIOPT Version :9

Sequence 1:NP_609763.1 Gene:CG18477 / 34922 FlyBaseID:FBgn0028864 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_648288.2 Gene:teq / 39048 FlyBaseID:FBgn0023479 Length:2792 Species:Drosophila melanogaster


Alignment Length:370 Identity:101/370 - (27%)
Similarity:147/370 - (39%) Gaps:78/370 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QVQAQGQNAELNQSCGASN--EHQCVPRHMCKVKIEF---------RMAMTY----RNLGCVSTA 68
            ||...|....::| |...|  ||.|  .|...|.:..         |.:.|.    |:||..:| 
  Fly  2446 QVMCFGNETSIDQ-CNHWNWGEHNC--NHTEDVALHCSAGPPPRSQRYSQTQIKGGRSLGRETT- 2506

  Fly    69 ICCPK-----------NLIIKEPRL--IINEPITDPQCGFVNSKGVTFSFREEDT---GLAQEAE 117
               ||           :..:..||.  |..:.:||           .::.|||..   .:||...
  Fly  2507 ---PKTYSQIGLWERSSKAVHTPRRCGIFKDDLTD-----------EYAHREERVVRGNVAQRGR 2557

  Fly   118 VPWMVALLDART------SSYVAGGALIAPHVVITARQRTENMTASQLVVRAGEWDFSTKTEQLP 176
            .||...:   ||      ||:..|..:|:...::||.............||.|  |......:..
  Fly  2558 HPWQATI---RTRGRGGISSHWCGAVVISKRHLLTAAHCLYGSPKGAYFVRVG--DHYANIAESS 2617

  Fly   177 SVDVPIRSIVRHPGFNLENGANN-VALVFLRRSLTSSRHINPICMPSAPKNFDF---SRCIFTGW 237
            .||..|.:...|..|......|| :|||.|:..|..|.::.|||:|.  ||.:.   .:|..:||
  Fly  2618 EVDSFIENWYLHENFRKGTHMNNDIALVVLKTPLKFSDYVQPICLPD--KNAELVEDRKCTISGW 2680

  Fly   238 G--KNSFDDPSYMNVLKKISLPVVQRRTCEQQLRLYYGNDFELDNSLMCAGG-EPGKDSCEGDGG 299
            |  |:....|:  .||....||::....|:|.  ..||:  .:...:.|||. :...|:||||.|
  Fly  2681 GSIKSGVSTPA--QVLGSAELPILADHVCKQS--NVYGS--AMSEGMFCAGSMDESVDACEGDSG 2739

  Fly   300 SPLACAIKDNPQRYELAGIVNFGVDCGLPGVPAVYTNVANVIEWI 344
            .||.|:..|....|   |::::|..||....|.||..|.:.|:||
  Fly  2740 GPLVCSDDDGETLY---GLISWGQHCGFKNRPGVYVRVNHYIDWI 2781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18477NP_609763.1 Tryp_SPc 113..344 CDD:214473 72/243 (30%)
Tryp_SPc 113..344 CDD:238113 72/243 (30%)
teqNP_648288.2 CBM_14 65..115 CDD:279884
ChtBD2 136..184 CDD:214696
ChtBD2 215..261 CDD:214696
ChtBD2 284..327 CDD:214696
CBM_14 521..569 CDD:279884
ChtBD2 608..654 CDD:214696
ChtBD2 709..752 CDD:214696
CBM_14 782..830 CDD:279884
ChtBD2 864..909 CDD:214696
CBM_14 942..993 CDD:279884
RCR <1051..1126 CDD:304939
RCR <1116..1210 CDD:304939
ChtBD2 1324..1369 CDD:214696
ChtBD2 1474..1518 CDD:214696
LDLa 2193..2222 CDD:238060
SR 2229..2331 CDD:214555
SRCR 2234..2332 CDD:278931
LDLa 2337..2370 CDD:197566
SR 2382..2480 CDD:214555 11/36 (31%)
SRCR 2386..2480 CDD:278931 11/36 (31%)
Tryp_SPc 2546..2781 CDD:214473 72/250 (29%)
Tryp_SPc 2547..2784 CDD:238113 74/251 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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