DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18477 and ndl

DIOPT Version :9

Sequence 1:NP_609763.1 Gene:CG18477 / 34922 FlyBaseID:FBgn0028864 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster


Alignment Length:461 Identity:99/461 - (21%)
Similarity:174/461 - (37%) Gaps:93/461 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QSCGASNEHQCVPRHMCKVKIEFRMAMTYRNLGCVSTAICCPKNLIIKEPRLIINEPITDPQCGF 95
            |:|...|.|..:..|:..||             |.......|....:.|....:...::|     
  Fly  1089 QACHGRNSHDSLVDHVAYVK-------------CPPMQCGLPSKSSMLEHSKRVRRAVSD----- 1135

  Fly    96 VNSKGVTFSFREEDTGLAQEAEVPWMVALLDARTSSYVAGGALIAPHVVITARQRTENMTASQLV 160
              ||.:....|..........:.|::||:.  |...:..||.:.:...:|:|.....|.......
  Fly  1136 --SKEIVGDGRIVGGSYTSALQWPFVVAIY--RNGKFHCGGTIYSDRWIISAAHCVINYGKYFYE 1196

  Fly   161 VRAGEWDFSTKTEQLPSVDV-PIRSIVRHPGFNLENGANNVALVFLRRSLTSSRHINPICMPSAP 224
            ||||   ...::...|:..: |:..:|.|..:...:..|:::|:.|...|..:|.:.|||:|...
  Fly  1197 VRAG---LLRRSSYSPATQIQPVSHVVVHQAYERRSMRNDLSLLRLLNPLQFNRWVKPICLPDKG 1258

  Fly   225 KN----------FDFSRCIFTGWG----KNSFDDPSYMNVLKKISLPVVQRRTC---EQQLRLYY 272
            :.          .:.:.|...|||    |....||     ::::.:|:  |:.|   |.|.    
  Fly  1259 RTTVGDDWIWGPVEHTLCTVVGWGAIREKGPSSDP-----MRQVIVPI--RKKCTDPEDQA---- 1312

  Fly   273 GNDFELDNSLMCAGG-EPGKDSCEGDGGSPLACAIKDNPQRYELAGIVNFGVDCGLPGVPAVYTN 336
                   :..:|||. :.|:|:|:||.|.||.|....||..:.|||:|:.|..|..|....|||.
  Fly  1313 -------SEDICAGDPDGGRDACQGDSGGPLFCRSVSNPDEFYLAGVVSHGNGCARPQEFGVYTR 1370

  Fly   337 VANVIEWITLTTVNMPLPEEREEVPYASPTLSAGPYLNQWN-----------QPNYEWLPTGYPN 390
            |...::|:.:.|....||:       ..|......::..|.           ..|.:.| .|...
  Fly  1371 VTLYLDWLEMATTPRLLPK-------LQPLQLCPGFICVWGGKRCIAKRQRCDRNVDCL-GGEDE 1427

  Fly   391 V----NSIPWQLQEANNDLANSQYVRYYPVENVGINIHSAGHGNDQQIVRPIQQDI--PKDSDDL 449
            |    |.:|..:.....:::.:....|:||:      .|......::::....:|:  .:|.:||
  Fly  1428 VGCTYNFLPDMVGGVRQNISTTTESDYHPVK------ESEEKSKMREVIPIDDEDLKAEQDEEDL 1486

  Fly   450 FNSVFS 455
            ..|..|
  Fly  1487 LKSTTS 1492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18477NP_609763.1 Tryp_SPc 113..344 CDD:214473 63/249 (25%)
Tryp_SPc 113..344 CDD:238113 63/249 (25%)
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1144..1377 CDD:214473 64/255 (25%)
Tryp_SPc 1145..1379 CDD:238113 64/256 (25%)
LDLa 1399..1430 CDD:238060 5/31 (16%)
Metaviral_G 1448..1600 CDD:118131 10/51 (20%)
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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