DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18477 and Prss42

DIOPT Version :10

Sequence 1:NP_609763.1 Gene:CG18477 / 34922 FlyBaseID:FBgn0028864 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001100333.2 Gene:Prss42 / 301027 RGDID:1562548 Length:340 Species:Rattus norvegicus


Alignment Length:245 Identity:77/245 - (31%)
Similarity:129/245 - (52%) Gaps:21/245 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 AQEAEVPWMVALLDARTSSYVAGGALIAPHVVITARQRTENMTASQLVVRAGEWDFSTKTEQLPS 177
            |:|.:.||.|:|  .....:|.||:|:....|:||.....:..  |..|:.|:   .:...|..|
  Rat    90 AEEGKWPWQVSL--RVRHMHVCGGSLLNSQWVLTAAHCIHSRV--QYNVKMGD---RSVYRQNTS 147

  Fly   178 VDVPIRSIVRHPGFNLENGA-NNVALVFLRRSLTSSRHINPICMPSAPKNFDF-SRCIFTGWGKN 240
            :.:||::|..||.|:..... |::||:.|::.:..:..|:|||:|:...:... ::|..||||| 
  Rat   148 LVIPIQNIFVHPKFSTTTVVQNDIALLKLQQPVNFTSSIHPICVPTGTFHVKAGTKCWVTGWGK- 211

  Fly   241 SFDDPSY----MNVLKKISLPVVQRRTCEQQLRLYYGNDFEL-DNSLMCAGGEPGKDSCEGDGGS 300
              .||..    ..:|:::...::....|.:.|:.......:| ...::||..|.|||:|:||.|.
  Rat   212 --PDPGAPQIPTEILQEVDQSIILYEECNEMLKKMASTSVDLVKRGMVCAYKEGGKDACQGDSGG 274

  Fly   301 PLACAIKDNPQRYELAGIVNFGVDCGLPGVPAVYTNVANVIEWITLTTVN 350
            ||:|.. ||  |:...|:|::|:.||..|.|.|||:||...:|: :|.||
  Rat   275 PLSCEF-DN--RWVQIGVVSWGIGCGRKGHPGVYTDVAFYNKWL-ITVVN 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18477NP_609763.1 Tryp_SPc 113..344 CDD:214473 73/237 (31%)
Prss42NP_001100333.2 Tryp_SPc 84..315 CDD:238113 73/237 (31%)

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