DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18477 and svh-1

DIOPT Version :9

Sequence 1:NP_609763.1 Gene:CG18477 / 34922 FlyBaseID:FBgn0028864 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:379 Identity:87/379 - (22%)
Similarity:141/379 - (37%) Gaps:112/379 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ILVAGQVQAQGQNAELNQSCGASNEHQCVPRHMCKVKIEFRMAMTYRNLGCVSTAICCPKNLIIK 78
            ||......:.|.|...:..|.......|. ||              ..:.|:|.           
 Worm   646 ILSTNATISSGYNVNCDVDCSIRRSSSCT-RH--------------ARISCISQ----------- 684

  Fly    79 EPRLIINEPITDPQCGF----VNSKGVTFSFREEDTGLAQEAEV-----------PWMVALLDAR 128
                  |...:..|||.    ||::         |...::.|.|           ||..||.:..
 Worm   685 ------NGMSSASQCGLRYVEVNAR---------DAAKSRIARVVGGFETVPGAFPWTAALRNKA 734

  Fly   129 TSSYVAGGALIAPHVVITAR---QRTENMTASQLVVRAGEWD-----------------FSTKTE 173
            |.::..|.:::....:|||.   :..|.:::.::||  |:||                 |....:
 Worm   735 TKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVV--GDWDNNQTDGNEQIFYLQRIHFYPLYK 797

  Fly   174 QLPSVDVPIRSIVRHPGFNLENGANNVALVFLRRSLTSSRHINPICMPSAPKNFDFS---RCIFT 235
            .:.|.|:.|..| .:||...                  :.:..|||:||  |:|.::   :|:.:
 Worm   798 DIFSHDIAILEI-PYPGIEF------------------NEYAQPICLPS--KDFVYTPGRQCVVS 841

  Fly   236 GWGKNSFDDPSYMNVLKKISLPVVQRRTCEQQLRLYYGNDFELDNSLMCAGG-EPGKDSCEGDGG 299
            |||....   .|...|:...:|::.|..|....::|    ..:..|..|||. |.|.|||:||.|
 Worm   842 GWGSMGL---RYAERLQAALIPIINRFDCVNSSQIY----SSMSRSAFCAGYLEGGIDSCQGDSG 899

  Fly   300 SPLACAIKDNPQRYELAGIVNFGVDCGLPGVPAVYTNVANVIEWITLTTVNMPL 353
            .|.||..:|.  .:.|||::::|..|.....|.:||.||..:.||:......|:
 Worm   900 GPFACRREDG--AFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAIINGQPV 951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18477NP_609763.1 Tryp_SPc 113..344 CDD:214473 67/265 (25%)
Tryp_SPc 113..344 CDD:238113 67/265 (25%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996 8/49 (16%)
Tryp_SPc 713..945 CDD:238113 68/263 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24258
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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