DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18477 and svh-1

DIOPT Version :10

Sequence 1:NP_609763.1 Gene:CG18477 / 34922 FlyBaseID:FBgn0028864 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:379 Identity:87/379 - (22%)
Similarity:141/379 - (37%) Gaps:112/379 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ILVAGQVQAQGQNAELNQSCGASNEHQCVPRHMCKVKIEFRMAMTYRNLGCVSTAICCPKNLIIK 78
            ||......:.|.|...:..|.......|. ||              ..:.|:|.           
 Worm   646 ILSTNATISSGYNVNCDVDCSIRRSSSCT-RH--------------ARISCISQ----------- 684

  Fly    79 EPRLIINEPITDPQCGF----VNSKGVTFSFREEDTGLAQEAEV-----------PWMVALLDAR 128
                  |...:..|||.    ||::         |...::.|.|           ||..||.:..
 Worm   685 ------NGMSSASQCGLRYVEVNAR---------DAAKSRIARVVGGFETVPGAFPWTAALRNKA 734

  Fly   129 TSSYVAGGALIAPHVVITAR---QRTENMTASQLVVRAGEWD-----------------FSTKTE 173
            |.::..|.:::....:|||.   :..|.:::.::||  |:||                 |....:
 Worm   735 TKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVV--GDWDNNQTDGNEQIFYLQRIHFYPLYK 797

  Fly   174 QLPSVDVPIRSIVRHPGFNLENGANNVALVFLRRSLTSSRHINPICMPSAPKNFDFS---RCIFT 235
            .:.|.|:.|..| .:||...                  :.:..|||:||  |:|.::   :|:.:
 Worm   798 DIFSHDIAILEI-PYPGIEF------------------NEYAQPICLPS--KDFVYTPGRQCVVS 841

  Fly   236 GWGKNSFDDPSYMNVLKKISLPVVQRRTCEQQLRLYYGNDFELDNSLMCAGG-EPGKDSCEGDGG 299
            |||....   .|...|:...:|::.|..|....::|    ..:..|..|||. |.|.|||:||.|
 Worm   842 GWGSMGL---RYAERLQAALIPIINRFDCVNSSQIY----SSMSRSAFCAGYLEGGIDSCQGDSG 899

  Fly   300 SPLACAIKDNPQRYELAGIVNFGVDCGLPGVPAVYTNVANVIEWITLTTVNMPL 353
            .|.||..:|.  .:.|||::::|..|.....|.:||.||..:.||:......|:
 Worm   900 GPFACRREDG--AFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAIINGQPV 951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18477NP_609763.1 Tryp_SPc 113..344 CDD:214473 67/265 (25%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SR 599..681 CDD:214555 8/49 (16%)
Tryp_SPc 713..945 CDD:238113 68/263 (26%)
Blue background indicates that the domain is not in the aligned region.

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