DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stol and yfbK

DIOPT Version :10

Sequence 1:NP_001188817.2 Gene:stol / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_416773.1 Gene:yfbK / 946743 ECOCYCID:G7177 Length:575 Species:Escherichia coli


Alignment Length:677 Identity:122/677 - (18%)
Similarity:229/677 - (33%) Gaps:233/677 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 RNAVMRLMDS------------------------------AEQAALSELEGQGQAESPMGGQQHY 132
            :|.:|.||.|                              |:|||:.|.|....|...:..|:  
E. coli     4 KNIIMLLMSSLILSGCGPQPENKESQQQQPSTPTEQQVLAAQQAAIKEAEQSAAAAKALAQQE-- 66

  Fly   133 DARRINEYNADGKLADGARHMDIRFMRRFERLPVNLSLSSILVPHGVD--------LDEPDVKSA 189
                :.:| :|.:...|          |.:..|.....:.....|..:        .|:..||..
E. coli    67 ----VQQY-SDKQALQG----------RLQEAPTFARAAKAKATHIANPGTARYQQFDDNPVKQV 116

  Fly   190 LQWSGHLDPLFQNNLEQDPALSWQYFGSSTGFLRRF--PGTAWPPEGSKGSKLIHDFRTHNWFVQ 252
            .|     :||...:|:.|.        .|...:|||  .|...||:..:..::::.|.: :|.::
E. coli   117 AQ-----NPLATFSLDVDT--------GSYANVRRFLNQGLLPPPDAVRVEEIVNYFPS-DWDIK 167

  Fly   253 -----AASSP---------------------------KD----------IMILLDASSSM-TEKS 274
                 .||.|                           ||          ::.|:|.|.|| :::.
E. coli   168 DKQSIPASKPIPFAMRYELAPAPWNEQRTLLKVDILAKDRKSEELPASNLVFLIDTSGSMISDER 232

  Fly   275 FDLGMATAFNILDTLGEDDFVNLITFSEVVKTPVPCFKDRMVRATPDNIQEIKSAVKAIKLQDTA 339
            ..|..::...::..|.|.|.:.::|::...:..:|..       :..:..||.:|:.::..:.:.
E. coli   233 LPLIQSSLKLLVKELREQDNIAIVTYAGDSRIALPSI-------SGSHKAEINAAIDSLDAEGST 290

  Fly   340 NFTAGLEYAFSLLHKYNQSGAG---SQCNQAIMLITE-------STSESHKDVIKQYNWPHMPVR 394
            |..||||.|      |.|:..|   ...|: |:|.|:       ...:|.:.::|:..  ...|.
E. coli   291 NGGAGLELA------YQQATKGFIKGGINR-ILLATDGDFNVGIDDPKSIESMVKKQR--ESGVT 346

  Fly   395 IFTYLIGSDSGSRSNLHDMACSNKGFFVQINDYDEARRKVIDYALVMARPMIMYQADH---PVHW 456
            :.|:.:|:.:.:.:.:..:|....|.:..|:...|| :||::..:   |.|::..|..   .:.:
E. coli   347 LSTFGVGNSNYNEAMMVRIADVGNGNYSYIDTLSEA-QKVLNSEM---RQMLITVAKDVKAQIEF 407

  Fly   457 SPVFVAGKSGGLGRDSEYQRRLVTTVSTPVFDRRNHSVRVANLLGVVGTDVPIEEIRKVIPQHKL 521
            :|.:|          :||::        ..:::|...|...|...|...|:...  :.:....:|
E. coli   408 NPAWV----------TEYRQ--------IGYEKRQLRVEHFNNDNVDAGDIGAG--KHITLLFEL 452

  Fly   522 GPNGYSFIVDNNGRVLYHPDLR-PLGDANQYIDQLKPKYASVDITELELPETEFGNNNEPIEINK 585
            ..||....:|   ::.|.||.: ...|..:.:..||.::......|.:|.|...|..     || 
E. coli   453 TLNGQKASID---KLRYAPDNKLAKSDKTKELAWLKIRWKYPQGKESQLVEFPLGPT-----IN- 508

  Fly   586 NLLNEMRGDMIKPKEGETEFTVMNHYDDSKRVSTRTHRYFYGPIEDTPFTLAIVLPEKYGSHEFV 650
                                                     .|.||..|..|:.   .||     
E. coli   509 -----------------------------------------APSEDMRFRAAVA---AYG----- 524

  Fly   651 SQQEIRHSRNNVTEYFKGDNWRVHPDW 677
              |::|.|     ||....:|:....|
E. coli   525 --QKLRGS-----EYLNNTSWQQIKQW 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stolNP_001188817.2 VWA_N 130..230 CDD:462464 19/109 (17%)
vWA_VGCC_like 245..428 CDD:238740 41/235 (17%)
PDC2_MCP_like 511..643 CDD:350337 21/132 (16%)
VGCC_alpha2 810..>1048 CDD:462488
yfbKNP_416773.1 YfbK 110..430 CDD:441879 69/371 (19%)
DUF3520 392..569 CDD:432277 41/238 (17%)
Blue background indicates that the domain is not in the aligned region.

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