DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stol and WAVH2

DIOPT Version :10

Sequence 1:NP_001188817.2 Gene:stol / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_680467.1 Gene:WAVH2 / 836695 AraportID:AT5G65683 Length:717 Species:Arabidopsis thaliana


Alignment Length:553 Identity:99/553 - (17%)
Similarity:192/553 - (34%) Gaps:150/553 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 ADGARHMDIRFMRRFERLPV----------NLSLSSILVPHGVDLDEPDVKSALQWSG------- 194
            :|..|..:||.::..:.|.|          .:||:.|...|..| :..||:....:.|       
plant   204 SDPIRRPEIREIKTGKSLRVYNDDEPLAYSPVSLAQINTIHESD-ENDDVEDDDDFPGFFRDSSI 267

  Fly   195 --HLDPLFQNNLEQDPALSWQYFGSSTGFLRRFPGTAWPPEGSKGSKLIHDFRTHNWFVQAASSP 257
              .:.|....|||                ::..|.:|....|.|.       .||...::..:||
plant   268 TSDMVPSISGNLE----------------VKLLPESAVVETGKKK-------ETHVVIMKLKASP 309

  Fly   258 K---------------DIMILLDASSS----MTEKSFDLGMATAFNILDTLGEDDFVNLITFSEV 303
            .               |::.:||.|:.    .|.|.      ...:::..|.|.|.::::.||..
plant   310 SPSSITDAIKARRPSIDLVTVLDLSNGGANLQTVKH------AMRSVISLLREMDRLSIVVFSTG 368

  Fly   304 VKTPVPCFKDRMVRATPDNIQEIKSAVKAIKLQDTANFTAGLEYAFSLLHKYNQSGAGSQCNQAI 368
            .|..:|     :.|.|....:..:..|.|:         .|:|         ...|.|...|.|:
plant   369 SKRLMP-----LRRMTAKGRRSARRMVDAL---------GGME---------TTGGVGMSVNDAL 410

  Fly   369 ---MLITESTSESH---------------KDVIK-QYNWPHMPVRIFTYLIGSDSGSRSNL--HD 412
               :.:.|...|.:               :.|:| :.|...:|     :::.:...||..:  |.
plant   411 KKAVKVVEDRREKNPSTSIFVLSDGQDQPEAVLKAKLNATRIP-----FVVSTTRFSRPEIPVHS 470

  Fly   413 MACSNKGFFVQ--IND-YDEARRKVIDYALVMAR-PMIMYQADHPVHWSPVF-VAGKSGGLGRDS 472
            :..::.|..:.  :.| :.|....:::..|...: .:.:....|....|.|: :.|:....|..|
plant   471 VYIASPGALLHAPLRDAFTERIASLLNVTLHNVKLNLSLVNGSHLTEISSVYSLTGRLENFGSGS 535

  Fly   473 ---------EYQRRLVTTVSTPVFDRRNHSV-RVANLLGVVGTDVPI---EEIRKVIPQHKLGPN 524
                     |.:|..:..:..|.....:|.| .|.:.:....|..|:   :|.|.:||:    |.
plant   536 VIQVGDLFAEEEREFLVELKVPTSSSGSHQVMSVQSSIVDQMTHQPMTCPKEKRFLIPR----PQ 596

  Fly   525 GYSFIVDNNGRVL-YHPDLRPLGDANQYIDQLKPKYASVDITELELPETEFGNNNEPIEINKNLL 588
            ...::..:..|:. .|...|.:.|:.:.|::.....|...:|......:...::...:|:.   |
plant   597 SVRYVSSSIERLRNLHSMCRAVADSRRLIEREDLSGAYQVLTTARSNASHSDDSLRSLEVE---L 658

  Fly   589 NEMRGDMIKPKEGETEFTVMNHYDDSKRVSTRT 621
            ||:  ..|||:.     :::|..:|.....|.|
plant   659 NEL--SRIKPRN-----SILNRTEDKPEQLTPT 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stolNP_001188817.2 VWA_N 130..230 CDD:462464 19/101 (19%)
vWA_VGCC_like 245..428 CDD:238740 38/225 (17%)
PDC2_MCP_like 511..643 CDD:350337 23/112 (21%)
VGCC_alpha2 810..>1048 CDD:462488
WAVH2NP_680467.1 RING-H2_WAVH2 134..189 CDD:438476
vWA_C3HC4_type 325..504 CDD:238743 36/212 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.