DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stol and AT2G38970

DIOPT Version :10

Sequence 1:NP_001188817.2 Gene:stol / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_850306.1 Gene:AT2G38970 / 818482 AraportID:AT2G38970 Length:692 Species:Arabidopsis thaliana


Alignment Length:522 Identity:100/522 - (19%)
Similarity:179/522 - (34%) Gaps:144/522 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 ESPMGGQQH--YDARRI--NEYNADGKLADGARHMDIRFMRRFERLPVNLSLSSILVPHGVDLDE 183
            |.||   ||  :|...:  ..||.|..         |..:.|..|....::....|.|.....|:
plant   121 EIPM---QHPSFDLPYLFARSYNNDAA---------ISLVHRLPRSRGVMNQGRGLAPEPSMFDD 173

  Fly   184 PD-VKSALQWSG--HLDPLFQNNLEQDPALSWQYFGSSTGFLRRFPGTAWPPEGSKGSK---LIH 242
            .: ::..|.:||  :.|.|..|:    |.....        |:.:|..:..|......|   |:|
plant   174 DERLEQQLVFSGKSYSDALENNH----PVRMMD--------LKIYPEVSAVPRADSREKFDVLVH 226

  Fly   243 DFRT-----------HNWFVQAASSPKDIMILLDASSSMTEKSFDLGMATAFNILDTLGEDDFVN 296
             .|.           :|...:...:|.|::.:||.|.||......|.......::..||.:|.::
plant   227 -LRAAAMVTGNANSLNNQISRYPRAPVDLVTVLDISGSMAGTKLALLKRAMGFVIQNLGSNDRLS 290

  Fly   297 LITFSEVVKTPVPCFKDRMVRATPDNIQEIKSAVKAIKLQDTANFTAGLEYAFSLLHKYNQSGAG 361
            :|.||...:...|     :.:.:....|....||.::......|...||.....::.........
plant   291 VIAFSSTARRLFP-----LTKMSDAGRQRALQAVNSVVANGGTNIAEGLRKGVKVMEDRRDKNPV 350

  Fly   362 SQCNQAIMLITESTSESHKDVIKQYNWPHMPVRIFTYLIGSDSGSRSNLHDMA---CSNKGFFVQ 423
            :    :|:|:::...                    ||.:.....:...|..::   |.:|.|.:.
plant   351 A----SIILLSDGRD--------------------TYTMNQADPNYKLLLPLSMHGCESKRFQIP 391

  Fly   424 INDYDEARRKVIDYALVMARPMIMYQADHP---VHWSPVFVAGKSGG----LGRDSEYQRRLVTT 481
            ::.:.                   :.:||.   :|    .|:..|||    :..:|..|..|...
plant   392 VHSFG-------------------FGSDHDASLMH----SVSETSGGTFSFIESESVIQDALAQC 433

  Fly   482 VSTPVFDRRNHSVRVANL-LGVVG--TDVPIEEIRKVIPQHKLGPNGYSFIVDNNGRVLYHPDLR 543
            :...:      ||.|..| |.:.|  :||.:..|:....|..:..:|.|..||            
plant   434 IGGLL------SVAVQELRLEIEGMCSDVHLSSIKAGSYQSLVSGDGRSGCVD------------ 480

  Fly   544 PLGDANQYIDQLKPKYASVDITELELPETEFGNNNEPIE---INKNLLNE----MRGDMIKPKEG 601
             :||.  |.|:.:....||:|     |..:.||....::   :.|:||.:    ::..|:|.:..
plant   481 -IGDL--YADEERDFLISVNI-----PPQKDGNETPLLKMRCVYKDLLTKEIVTLQSHMLKIQRP 537

  Fly   602 ET 603
            ||
plant   538 ET 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stolNP_001188817.2 VWA_N 130..230 CDD:462464 21/106 (20%)
vWA_VGCC_like 245..428 CDD:238740 31/196 (16%)
PDC2_MCP_like 511..643 CDD:350337 23/100 (23%)
VGCC_alpha2 810..>1048 CDD:462488
AT2G38970NP_850306.1 PEX10 <15..118 CDD:227861
RING-H2_WAVH2 68..121 CDD:438476 100/522 (19%)
vWFA 252..421 CDD:469594 35/220 (16%)
Vwaint 599..673 CDD:464221
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.