DRSC/TRiP Functional Genomics Resources

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Protein Alignment stol and WAVH1

DIOPT Version :10

Sequence 1:NP_001188817.2 Gene:stol / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_179853.1 Gene:WAVH1 / 816799 AraportID:AT2G22680 Length:683 Species:Arabidopsis thaliana


Alignment Length:542 Identity:95/542 - (17%)
Similarity:174/542 - (32%) Gaps:158/542 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EVRNWALKFGVDLWEFGRQFTKMNEIKSRFKDNDIEVKRKDGIILLRELAAEVKNFMDFKRNAVM 102
            |:||:|              ...::||...|:..:.|...|..::...::..          ...
plant   183 EIRNYA--------------KPESQIKPEIKNKSLRVYNDDEALISSPISPA----------GFH 223

  Fly   103 RLMDSAEQAALSELEG-QGQAESPMGGQQHYDARRINEYNADGKLADGARHMDIRFMRRFERLPV 166
            .:::|.|.....|..| .....||:      .|:.:.:.|.|                      |
plant   224 TILESDENEDCEEFTGFSVNTPSPL------TAKLLTDRNVD----------------------V 260

  Fly   167 NLSLSSILVPHGVDLDEPDVKSALQWSGHLDPLFQNNLEQDPALSWQYFGSSTGFLRRFPGTAWP 231
            .||..|.:|..|...:...|..              .::..|      |.::.||.||.      
plant   261 KLSPESAIVASGKGYETYSVVM--------------KVKSPP------FPTARGFARRV------ 299

  Fly   232 PEGSKGSKLIHDFRTHNWFVQAASSPKDIMILLDASSSMTEKSFDLGMATAFNILDTLGEDDFVN 296
                                     |.|::.:||.|...:....::...|...:|..|.|.|.::
plant   300 -------------------------PVDLVAVLDVSGRNSGGKLEMLKQTMRIVLSNLREMDRLS 339

  Fly   297 LITFSEVVKTPVPCFKDRMVRATPDNIQEIKSAVKAIKLQDTANFTAGLEYAFSLLHKYNQSGAG 361
            :|.||...|...|     :.|.|.:..:..:..|..|.:..:.: ..|:::          ||.|
plant   340 IIAFSSSSKRLSP-----LRRMTANGRRSARRIVDIITVPGSVS-GVGIDF----------SGEG 388

  Fly   362 SQCNQAIMLITESTSESHKDVIKQYNWPHMPVRIFT----YLIGSDSGSRSNLHDM----ACSNK 418
            ...|.|:....:...:.     :|.| |...|.:.|    :.:...:.||..:|.:    |....
plant   389 MSVNDALKKAVKVLDDR-----RQKN-PFTAVFVLTDRQAHQVAQLAHSRIPIHTIWLSHAIPED 447

  Fly   419 GFFVQINDYDEARRKVIDYALVMARPMIMYQADHPVHWSPVFVAGKSGGLGRDS--------EYQ 475
            .|...||.|  ....|.|..|.:.....:.|.:....:|   ::|:...||..|        |.:
plant   448 AFARTINGY--LSLSVQDLGLQLGIVSGLGQGEITSVYS---LSGRPAWLGTGSIRLGDMYAEEE 507

  Fly   476 RRLVTTVSTPVFD----RRNHSVRVANLLGVVGTDVPIEEIRKVIPQHKLGPNGYSFIVDNNGRV 536
            |.|:..:.:||.:    .|:|.:.......|   |...:|:|....:..|.|...:....:|..:
plant   508 RALLVEIKSPVNNSLTGSRSHKIMTVRSRYV---DPTTQELRNPEDRALLIPTPLTVRSSSNPNI 569

  Fly   537 L----YHPDLRPLGDANQYIDQ 554
            .    .|...|.:.::.:.|::
plant   570 SRLRNLHVSTRAVAESRRLIER 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stolNP_001188817.2 VWA_N 130..230 CDD:462464 16/99 (16%)
vWA_VGCC_like 245..428 CDD:238740 37/190 (19%)
PDC2_MCP_like 511..643 CDD:350337 8/48 (17%)
VGCC_alpha2 810..>1048 CDD:462488
WAVH1NP_179853.1 RING_Ubox 124..180 CDD:473075
vWA_C3HC4_type 301..461 CDD:238743 37/183 (20%)
Blue background indicates that the domain is not in the aligned region.

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