DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4587 and cacna2d1a

DIOPT Version :9

Sequence 1:NP_001188817.2 Gene:CG4587 / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:XP_009298560.1 Gene:cacna2d1a / 561434 ZFINID:ZDB-GENE-041210-215 Length:1093 Species:Danio rerio


Alignment Length:1275 Identity:311/1275 - (24%)
Similarity:537/1275 - (42%) Gaps:292/1275 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RNWALKFGVDLWEFGRQFTKMNEIKSRFKD--NDIEVKRKDGIILLRELAAEVKNFMDFKRNAVM 102
            |.||.|...||.:.....:.:.|:|..|.:  ....|::.:...|:.:.:.|::.|:..:..|:.
Zfish    38 RKWAEKMQEDLVQLIDSESGIKELKKIFNNFQRHYTVRQNNPRQLVEKASHEIEEFLANRSKALE 102

  Fly   103 RLMDSAEQAALSELEGQGQAESPMGGQQHYDARRINE---YNADGKLADGARHMDIRFMRRFE-- 162
            .|..:||     .|:.:.|.:..:.         :||   |||..|..:.......|.:..|.  
Zfish   103 ALATAAE-----NLQKEHQWKEDLD---------VNETIYYNAKDKSDNQTEPRKNRLILDFTED 153

  Fly   163 ---RLPVNLSLSSILVPHGVDLDEPDVKSALQWSGHLDPLFQNNLEQDPALSWQYFGSSTGFLRR 224
               :.||:.:.:::.:|..:......:.:.|.|:..||.:|:.|.|.||:|.||.|||:||..|.
Zfish   154 PAFKRPVSYNTTAVHIPTDIYEGSTIILNELNWTAALDDVFRKNKEDDPSLHWQVFGSATGLARY 218

  Fly   225 FPGTAWPPEGSKGSKLIHDFRTHNWFVQAASSPKDIMILLDASSSMTEKSFDLGMATAFNILDTL 289
            ||.:.|  ..||....::|.|...|::|.|:||||::||:|||.|::..:..|...:...:|:||
Zfish   219 FPASPW--VDSKNKIDLYDVRRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETL 281

  Fly   290 GEDDFVNLITFSEVVKTPVPCFKDRMVRATPDNIQEIKSAVKAIKLQDTANFTAGLEYAFSLLHK 354
            .:||:||:::|:...|: |.|| :.:|:|...|.:.:|.||:.|....|.::..|.:.||:.|..
Zfish   282 SDDDYVNIVSFNNSAKS-VACF-ENLVQANVRNKKTLKEAVQKITANGTTDYKIGFKEAFNQLAS 344

  Fly   355 YNQSGAGSQCNQAIMLITESTSESHKDVIKQYNWPHMPVRIFTYLIGSDSGSRSNLHDMACSNKG 419
            .|.|.|  .||:.|||.|:...:...::..:|| ....|||||:.:|..:..::.:..|||.|||
Zfish   345 MNVSRA--NCNKIIMLFTDGGEDKASEIFDEYN-SDKRVRIFTFSVGQHNYDKAPIQYMACHNKG 406

  Fly   420 FFVQINDYDEARRKVIDYALVMARPMIMYQADHP---VHWSPVFVAGKSGGLGRDSEYQRRLVTT 481
            ::.:|......|....:|..|:.|||:  :||..   |.|:.|:|.....|          ||.|
Zfish   407 YYYEIPSIGAIRINTQEYLDVLGRPMV--KADKKAKNVQWTNVYVDALELG----------LVVT 459

  Fly   482 VSTPVFDRRNHSVRVAN---------LLGVVGTDVPIEEIRKVIPQHKLGPNGYSFIVDNNGRVL 537
            .:.|||::...|.....         :|||:..||.:::|:::.|.:.||||||.|.:|.||.||
Zfish   460 GTLPVFNKTRTSKEKPKGKNLGPSQMILGVMAIDVSLDDIKRLTPHYTLGPNGYYFAIDPNGYVL 524

  Fly   538 YHPDLRPLGDANQYIDQLKPKYASVDITELELPETEFGNNNEPIEINKNLLNEMRGDMIKPKEGE 602
            .||:|:|.       |....:..::|..:.|:        .:.:::      ::|..||..:..:
Zfish   525 LHPNLQPK-------DLKSQEPVTLDFLDAEM--------EDEVKV------DIRRSMIDGERSQ 568

  Fly   603 TEFTVMNHYDDSKRVSTRTHRYFYGPIEDTPFTLAIVLPEKYGSHEFVSQQEIRHSRNNVTEYFK 667
            ..|..:....|.:.:......|.:.|:.|..::||:|||:...|                  |.|
Zfish   569 IRFHTLMKSQDERYIDKGFRTYTWSPVTDADYSLALVLPDYSMS------------------YIK 615

  Fly   668 ---GDNWRVHPDWVYCEYNSVSD-LEKERESSGEY---SSRDQEPSFGSPEEQVLHFLSRAGRPG 725
               ||.......|: .|..:||: |:.::.....|   :.||......:..|.:..||....   
Zfish   616 ATIGDTITQAKSWI-LENLAVSESLQVDKFEEYGYTLIAPRDYCEDLKAQNENMTQFLIDFN--- 676

  Fly   726 WKWMSVR-PKSPQPHHNMHSGSNGGNAPGSSHFGSQHQSSQGSRKAEPYFCDRALLQSLVRDAMV 789
             :::.|: |..||                                     |:..|:..|:.||.:
Zfish   677 -EYIDVKTPNDPQ-------------------------------------CNMDLMNRLLLDAGI 703

  Fly   790 TDGLDRNTTGSSSGKEDKHPIATLMAILKRQGYQKFVVATSFVATRSGLLRWIDHVKRPEDTPEP 854
            |..|.::..                   |.|...:  :...||||..|:.|........|.|.: 
Zfish   704 TAELVKHWN-------------------KNQLSDR--IKAKFVATDGGVTRVYPASAGSEWTGQ- 746

  Fly   855 HFSEDNVRAMDTSWYKRAIDQHSVEPDSFVYS-VPFGSGYAIKSNATLVTASHAIFVEHRGHKAA 918
                  ....::|:|||::|.     |.:|:: :||......:|  .||:.:..:.::....|.|
Zfish   747 ------AETYESSFYKRSLDN-----DLYVFTPLPFTGNKTEES--VLVSRAMDLRIDEFWLKPA 798

  Fly   919 AGVVGLQFQHDSLAKHFIN--ITSACTG-MTGCKRTCASDNLDCYVLDNSGFVIISEE---MEHT 977
              |||::....|..:.|:|  ||..|.| :.||:|.  .:.|||.:||:.||::::.:   ::..
Zfish   799 --VVGVKLDVQSWMESFMNTTITPKCEGEICGCRRN--DEYLDCVLLDDGGFLVMANQDKYIDQI 859

  Fly   978 GKFFGQIDGTIMDSLVQDRIYKRVTVNDYQGVCSDADNPYTAAG--GILKPN-----RLGSWFFN 1035
            |:|||.||.::|.:|:...::......|||.:|........|||  .:..|.     .:|.|   
Zfish   860 GEFFGMIDPSLMRNLMNVSLFSVNITYDYQALCEPTRESKAAAGLRSVYVPTIADILNIGWW--- 921

  Fly  1036 HLLALSAAWLSLMPASLRAWPQEEYTYDNEDVVFVDNNYSDEYEFGNENEYNMQ---VDQEMDEF 1097
               |.:||| |:|        |:.:.    .:.|  .|:.:..:..:|:|...:   :.::...|
Zfish   922 ---ASAAAW-SIM--------QQLFV----SITF--PNFLEAVDISDESETPSKESCIKEQTQYF 968

  Fly  1098 FTTADVEYTTPPPRQHKPHVGPRFSPDPHNARRCDLRTDLYMLQPERLNQGGQNNPLKGKLTNCH 1162
            |.:.|..:                                                 ||.: :| 
Zfish   969 FDSNDTTF-------------------------------------------------KGTV-DC- 982

  Fly  1163 VSGCERPFSVQKIPHSNLILLVVDT-LCP--CGSKQLDIEPLEEAGVIGACSTRRQGQEQESRRR 1224
             ..|.|.|..:|:..:||:|:|.|| :|.  |..|....|.....|. ..|..   .|....|:.
Zfish   983 -QNCSRQFIAEKLMKTNLVLIVADTEMCSQMCEEKPFSQEEKPSPGP-DPCLI---SQNPRYRKG 1042

  Fly  1225 PKKCI--NYHPEEIEIQQCGRGSTLLHMSGSVIVAHLLMV 1262
            |.:|.  |.:.|.:    |.|.      :||.:::.|||:
Zfish  1043 PMECFDNNVNDEAM----CRRN------AGSPLLSSLLML 1072

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4587NP_001188817.2 VWA_N 108..230 CDD:285584 35/129 (27%)
vWA_VGCC_like 245..428 CDD:238740 63/182 (35%)
Cache_1 456..544 CDD:280839 33/96 (34%)
VGCC_alpha2 590..>647 CDD:285647 13/56 (23%)
cacna2d1aXP_009298560.1 VWA_N 110..224 CDD:285584 33/122 (27%)
vWFA 237..415 CDD:294047 63/182 (35%)
Cache_1 444..532 CDD:280839 33/97 (34%)
VGCC_alpha2 545..627 CDD:285647 19/113 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000496
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10166
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X365
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.010

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