DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4587 and CG16868

DIOPT Version :9

Sequence 1:NP_001188817.2 Gene:CG4587 / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_611469.1 Gene:CG16868 / 37298 FlyBaseID:FBgn0034498 Length:1449 Species:Drosophila melanogaster


Alignment Length:1175 Identity:209/1175 - (17%)
Similarity:375/1175 - (31%) Gaps:424/1175 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VAIVLGVL---IFKMHIFVAFADQDED--------------------IPHNE------------- 38
            |.::|.||   ....|:.:|.|:...:                    :.||:             
  Fly    10 VLLILAVLACPTSSQHVPLAMANSTSNQVPTDPGFMPLQQSPGSVFFVHHNQQNAMQLRHSMEGK 74

  Fly    39 ---VRNWALKFGVDLWEFGRQFTKMNEIKSRFKDNDIEVKRKDGIILLRELAAEVKNFMDFKRNA 100
               :||..|:..    :....|..|:...::...|..:....|..::..:|..:::.|.:     
  Fly    75 LRNIRNTELRVA----KIQEIFDSMHFSSAKGASNTRQASSNDSNVVNPQLQRDLQLFSE----- 130

  Fly   101 VMRLMDSAEQAALSELEGQGQAESPMGGQQHYDARRINEYNADGKLADGARHMDIRFMRRFERLP 165
              ||....::|....||        :.....|:..::.:|:.|.:..:....||:..  ..|.|.
  Fly   131 --RLSKKIQKATYVVLE--------LRELLRYNLTKVWQYSYDDEDDESESEMDLEM--ELEDLH 183

  Fly   166 VNLSLS------SILVPHGVDLDEPDVKSALQWSGHLDPLFQNNLEQDPALSW------------ 212
            ...:.|      .:.:...::..:||.::.|::..........|.:|...|::            
  Fly   184 ARNTASPTDEHVQLYLNTQIESCQPDYETDLEYGSSSTQSIHYNRQQIQILNYLKSDDARATFLN 248

  Fly   213 ----------QYFGSSTGFLRRFPGTAWPPEGSKGSKLIHDFRTHNWFVQ--------------- 252
                      .|..:....|:|....: ..|.|....:..:...|.:|:.               
  Fly   249 ENNARSLAVNGYISNQLVLLKRRLSRS-DAENSNSKPISGNHFKHIYFLSNSDGASASLHFRQLY 312

  Fly   253 -AASSPKDIMILLDASSSMTEKSFDLGMATAFNILDTLGEDDFVNLITF-SEVVKTPVPCFKDR- 314
             :|...|.::.|:|..|:::.:.|||..:....:|..|.:.|.|:|:|. ||.....:..|... 
  Fly   313 VSAIKQKFVLFLIDVGSALSAELFDLSKSFVHEMLQLLEDTDKVSLVTVASEANFMSLEAFPAEA 377

  Fly   315 ---MVRATPDNIQEIKSAVKAI-KLQDTANFTAGLEYAFSLLHKYNQSGAGSQCNQAIMLITEST 375
               :..||..:.:||.|.:.:: :.|...|.:.|.||:|.|||:..|||                
  Fly   378 GHGIYSATRAHKEEIISFINSLSRAQAFTNHSLGFEYSFELLHRLQQSG---------------- 426

  Fly   376 SESHKDVIKQYNWPHMPVRIFTYLIGSDSGSRSNLHDMACSNKGFFVQINDYDEARRKVID---- 436
                     ..|....||. |.|:                 .:|....::|.....|.|.|    
  Fly   427 ---------MINTAEQPVE-FVYI-----------------TRGLLTNLSDAMAVLRVVADGQRR 464

  Fly   437 ---------YALVMARPMIMYQAD---------------HPVHWSP-----------VFVAGK-- 464
                     .|:|:....|||:..               ....|.|           .:|..|  
  Fly   465 LRAPVIINTCAVVLDEKRIMYEKQFLNDVASQNYTKYEIDVASWWPSGQEASELVGRFYVLSKMH 529

  Fly   465 -SGGLGRDSE------YQRRLVT---TVSTPVFDRRNHSVRVANL-----LGVVGTDVPIEEIRK 514
             ...|.:.|.      :|.|.::   .|..||.|..:..|.|:..     .||||.::.:.::.:
  Fly   530 AETSLPQTSSRIFGPLFQERYLSDTLEVHPPVVDADSGDVLVSITHAVPPYGVVGVNLYLSDLLE 594

  Fly   515 VIPQH-------KLGPNGYSFIVD-NNGRVLYHPDL-RPLGDANQYIDQLKPKYASVDITELELP 570
            .:..:       |.| .||:|::| :.|..|.||.. |||       .|.:..| .|:|..|| .
  Fly   595 DLLNYPSTTSSAKQG-LGYAFLLDRSTGNTLAHPAFPRPL-------IQRETSY-PVNIAYLE-N 649

  Fly   571 ETEFGNNNEPIEINKNLLNEMRGDMIKPKEGETEFTVMNHYDDSKRVSTRTHRYFYGPIEDTPFT 635
            .|:|.::     |...||.|                      :|..|:|..              
  Fly   650 ATDFSSH-----IRDRLLRE----------------------ESGNVTTDV-------------- 673

  Fly   636 LAIVLPEKYGSHEFVSQQEIRHSRNNVTEYFKGDNWR-VHPDWVYCEYNSVSDLEKERESSGEYS 699
                         :|.:|.::.:      |:    |: |...:|.|..:|..|..:...|:..|:
  Fly   674 -------------YVGRQRLQRT------YY----WQSVLGFYVLCLVSSGGDTLRNVSSTQRYN 715

  Fly   700 SRD----QEPS-FGSPEEQVLHFLSRAGRPGWKWMSVRPKSPQPHHNMHSGSNGGNAPG------ 753
            .:|    .||. :|...:.:.|.|..                         :.||:||.      
  Fly   716 LKDTVSNYEPGYYGESMDLLYHRLDL-------------------------NQGGSAPPKTCRYF 755

  Fly   754 ------------------SSHFGSQHQSSQGS--RKAEPYFCDRALLQSLVRDAMVTDGLDRNTT 798
                              .|.||..|.:...:  |..|.       :.:.:||   :.||..|..
  Fly   756 RQVATMDAPTLFLSAAAFESPFGFLHNNRPRTQLRHVES-------IMAYLRD---SSGLLANMG 810

  Fly   799 GSSSGKEDKHPIATLMAILKR-----QGYQKFVVATSFVATRSGLLRW---------IDHVKRPE 849
            ...|.:.:...:...|..|:|     :|..:..|...::|:.||:|:.         .|..:|| 
  Fly   811 LRPSIRHEVGVLYQAMQQLRRRHQDARGSLRSHVIRRYIASVSGVLQLYPGCLLSSSYDPTRRP- 874

  Fly   850 DTPEPHFSEDNVRAMDTSWYKRAIDQHSVEPDSFVYSVPF----GSGYAIKSNATLVTASHAIF- 909
                              |:::||.|    |...|.:.|:    |:||       ::|.:|.|| 
  Fly   875 ------------------WFRQAIAQ----PGKIVSTAPYLDAGGAGY-------IITIAHTIFE 910

  Fly   910 -VEHRGHKA----AAGVVGLQFQHDSLAKHFINITSACTGMTGCKRTCASDNLDCYVLDNSGFVI 969
             ..|..|.|    ...||.|...:....:..:..|.          .|...::.|.:.::.|:::
  Fly   911 GKAHALHSAQQDRPVAVVALDVPYAFYYRLILEGTP----------ICQLPHIKCLLFEHEGYLL 965

  Fly   970 ISEEM 974
            ....|
  Fly   966 AHPSM 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4587NP_001188817.2 VWA_N 108..230 CDD:285584 20/149 (13%)
vWA_VGCC_like 245..428 CDD:238740 43/204 (21%)
Cache_1 456..544 CDD:280839 28/124 (23%)
VGCC_alpha2 590..>647 CDD:285647 4/56 (7%)
CG16868NP_611469.1 vWFA 308..>426 CDD:294047 32/117 (27%)
Cache_1 559..627 CDD:280839 17/68 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10166
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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