DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4587 and stj

DIOPT Version :9

Sequence 1:NP_001188817.2 Gene:CG4587 / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_001246303.1 Gene:stj / 36526 FlyBaseID:FBgn0261041 Length:1271 Species:Drosophila melanogaster


Alignment Length:1400 Identity:494/1400 - (35%)
Similarity:709/1400 - (50%) Gaps:280/1400 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 WSCFVA---IVLGVLIFKMHIFVAFA-----DQDEDIPHNEVRNWALKFGVDLWEFGRQFTKMNE 62
            ||..:|   :.||:|    .:.|..|     ...|:|.:|.|.:||.|.|::|:..|...|:..|
  Fly     3 WSRLLAWWRLCLGLL----SVLVCLAPCVNLQPAENINYNLVHSWADKLGMELFHLGDFITRRKE 63

  Fly    63 IKSRFKDNDIEVKRKDGIILLRELAAEVKNFMDFKRNAVMRLMDSAEQAALSELEGQGQAESPMG 127
            ::..||  |.:|..::|..::..:|.|::..||.|.:||.|:||:||..|||.            
  Fly    64 VQESFK--DAKVVSRNGASIVDSMAKEIEMMMDLKVSAVRRIMDTAENTALSH------------ 114

  Fly   128 GQQHYDARRINEYNADGKLADG---------ARHMD----------------IRFMRRFERLPVN 167
             |.....:..:.|:|...|..|         |..||                :.....|...|||
  Fly   115 -QNDMADKMFSYYSAKEMLEPGDPVPPIPTPAPDMDKDIGEPLIYVQPKVVVLEPRPEFHNTPVN 178

  Fly   168 LSLSSILVPHGVDLDEPDVKSALQWSGHLDPLFQNNLEQDPALSWQYFGSSTGFLRRFPGTAW-- 230
            .|:||:.||..|....|||..|:|||.:||.:|::|.:.||.||||:|||||||:|:||.:.|  
  Fly   179 FSVSSVHVPVNVFDRAPDVIKAIQWSENLDQIFRDNYKNDPTLSWQFFGSSTGFMRQFPASKWRK 243

  Fly   231 --PPEGSKGSKLIHDFRTHNWFVQAASSPKDIMILLDASSSMTEKSFDLGMATAFNILDTLGEDD 293
              |.:       ::|.|..:|:::||:|||||:||:|.|.||..:..|:.......||||||.:|
  Fly   244 DVPVD-------LYDCRLRSWYMEAATSPKDIVILMDGSGSMLGQRLDIAKHVVNTILDTLGTND 301

  Fly   294 FVNLITFSEVVKTPVPCFKDRMVRATPDNIQEIKSAVKAIKLQDTANFTAGLEYAFSLLHKYNQS 358
            |||:.||.:.|...||||:|.:::|...||:|:|..::..:.:..||:||.|..||.||.:...|
  Fly   302 FVNIFTFDKEVSPVVPCFEDTLIQANLGNIRELKEGIELFRPKSIANYTAALTKAFELLEETKLS 366

  Fly   359 GAGSQCNQAIMLITESTSESHKDVIKQYNW---PHMPVRIFTYLIGSDSGSRSNLHDMACSNKGF 420
            ..|:|||||||:|.:...|::::|.:.:||   |:.|||:||||||.:..:..::..|||.|:|:
  Fly   367 SRGAQCNQAIMIIGDGAPENNREVFELHNWRDPPYKPVRVFTYLIGKEVANWDDIRWMACENQGY 431

  Fly   421 FVQINDYDEARRKVIDYALVMARPMIMYQADHPVHWSPVFVAGKSGGLG------RDSEYQR--- 476
            :|.::|..|.|..|::|..|||||:::.:.||||.||.|:...:...|.      ...|||:   
  Fly   432 YVHLSDTAEVREMVLNYIPVMARPLVLGRHDHPVIWSQVYADIEDTKLSDYLWDINQCEYQKADV 496

  Fly   477 -------------------------------------RLVTTVSTPVFDRRNHSV---------- 494
                                                 :.:||||.|::|||.:::          
  Fly   497 LEYWQVHDRMLEPSEMHRRKYRRMKETWNQPVDSNVYQFMTTVSMPIYDRRENALINLTTDINPA 561

  Fly   495 --------RVANLLGVVGTDVPIEEIRKVIPQHKLGPNGYSFIVDNNGRVLYHPDLRPLGDANQY 551
                    |:||:|||.||||||.||:|::....||.|||:|||.|||.||:|||.||:...  |
  Fly   562 AKINLQVTRIANILGVAGTDVPINEIKKLLSPFTLGVNGYAFIVTNNGYVLFHPDFRPIFQG--Y 624

  Fly   552 IDQLKPKYASVDITELELPETEFGNNNEPIEINKNLLNEMRGDMIKPKEGETEFTVMNHYDDSKR 616
            |  |||.|.|||:.|:||.:     ::.|......:|..:|..:|....|.....|.||:|:.||
  Fly   625 I--LKPAYNSVDMIEVELLD-----DDRPARDFNPVLMTIRDSIINQSTGSKWMLVKNHFDEMKR 682

  Fly   617 VSTRTHRYFYGPIEDTPFTLAIVLPEKYG-SH-EFVSQQEIRH---SRNNVTEYFKGDNWRVHPD 676
            |:....:|::..|:.|||||.|..||:|| || :..:.|||..   ...|:...|.|..|::|||
  Fly   683 VARVKRQYYWTAIKKTPFTLVISYPEQYGVSHMDIRADQEIHRISIKGTNLRSVFSGKRWKIHPD 747

  Fly   677 WVYCEYNSVSDLEKERESSGEYSSRDQEPSFGSPEEQVLHFLSRAGRPGWKWMSVRPKSPQPHHN 741
            |::|                ::|:|    :|.:||.::|:||.|...|||:|...|...| |.|.
  Fly   748 WLFC----------------KHSNR----TFKTPEIELLYFLERMSEPGWRWPGSRSAMP-PEHA 791

  Fly   742 MHSGSNGGNAPGSSHFGSQHQSSQGS----RKAEPYFCDRALLQSLVRDAMVTDGLDRNTTGSSS 802
            ....||              .||.|.    .:.|.|:|||.|:|:||.||.||.....||  |.:
  Fly   792 AAMFSN--------------NSSTGRYPSINEKESYYCDRQLMQALVFDARVTGWFSNNT--SFN 840

  Fly   803 GKEDK-----HPIATLMAILKRQGY-QKFVVATSFVATRSGLLRWID-HVKRPEDTPEPH-FSED 859
            .|:||     .|||.||.:|.|..: |:|.|..:|:||.|||.||.: |....|::.... ||::
  Fly   841 SKDDKGTSASSPIAVLMGLLPRNEFKQRFGVTVAFLATHSGLTRWHEFHSNAAEESGVGETFSQN 905

  Fly   860 NVRAMDTSWYKRAIDQHSVEPDSFVYSVPFGSGYAIKSNA-TLVTASHAIFVEHRGHKAAAGVVG 923
            |.||:|..|||||:|||.|..:||||||||.:|   :||: .|||||||:|....|..|.|.|||
  Fly   906 NTRAIDEIWYKRAVDQHFVREESFVYSVPFDAG---ESNSEILVTASHAVFHNEGGKTAPAAVVG 967

  Fly   924 LQFQHDSLAKHFINITSACTGMTGCKRTCASDNLDCYVLDNSGFVIISEEMEHTGKFFGQIDGTI 988
            .||||.:|.|.|.|||.         ..||.|:.|||:|||:|:||||..:..||:|||:::|.|
  Fly   968 FQFQHSALYKLFHNITG---------NACAVDDKDCYILDNNGYVIISTRVHETGRFFGEVNGAI 1023

  Fly   989 MDSLVQDRIYKRVTVNDYQGVCSDADNPYTAAGGILKP----NRLGSWFFNHLLALSAAWLSLMP 1049
            |..|:::.:|::|||.|||.||.::.|...|:..:|.|    .|:|.|..:     :|.|..:  
  Fly  1024 MKRLLEENVYRQVTVYDYQAVCFESKNDNNASSMLLSPLFHLLRVGKWLLH-----TALWYIV-- 1081

  Fly  1050 ASLRAWPQEEYTYDNEDVVFVDNNYSDEYEFGNENEYNMQVDQEMDEFFTTADVEYTTPPPRQHK 1114
             .|..|...           |.::|:|.|...|:.|                     .|||..|.
  Fly  1082 -QLLQWAPG-----------VSSHYADMYGDSNDTE---------------------PPPPEPHP 1113

  Fly  1115 PH-----VGPRFSPDPH----------NARRCDLRTDLYMLQPERLNQGGQNNPLKGKLTNCHVS 1164
            .|     .|.....|.|          ..:.||::.|||.|..|:.|          .:.|....
  Fly  1114 DHHARNGNGHGKKDDDHWLRYLTLHRTRLKPCDMKRDLYTLFNEKDN----------VVYNMTAH 1168

  Fly  1165 GCERPFSVQKIPHSNLILLVVDTLCP-CGSKQLDIEPLE---EAGVIGACSTRRQGQEQESRRRP 1225
            .|||||.|..||.|||||||:|.||| .||..|.:.|..   ...|..:.:..:|.:| .:|.||
  Fly  1169 ACERPFVVLPIPFSNLILLVIDQLCPRDGSVVLTVNPQPIDYHLSVNDSLACYKQARE-FNRMRP 1232

  Fly  1226 KKCINYHPEEIEIQQCGRGSTLLHMSGSVIVAHLL 1260
            ..||:.|..|..|:.||:..::....|.:::.|:|
  Fly  1233 HSCISRHANESGIKLCGKACSVYANLGLLLLCHIL 1267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4587NP_001188817.2 VWA_N 108..230 CDD:285584 50/146 (34%)
vWA_VGCC_like 245..428 CDD:238740 79/185 (43%)
Cache_1 456..544 CDD:280839 46/151 (30%)
VGCC_alpha2 590..>647 CDD:285647 22/57 (39%)
stjNP_001246303.1 VWA_N 107..241 CDD:285584 50/146 (34%)
vWA_VGCC_like 253..439 CDD:238740 79/185 (43%)
Cache_1 524..619 CDD:280839 39/94 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 43 1.000 Domainoid score I4730
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 572 1.000 Inparanoid score I1017
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110668at33208
OrthoFinder 1 1.000 - - FOG0000496
OrthoInspector 1 1.000 - - mtm6553
orthoMCL 1 0.900 - - OOG6_103783
Panther 1 1.100 - - P PTHR10166
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X365
98.970

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