DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stol and Cacna2d4

DIOPT Version :10

Sequence 1:NP_001188817.2 Gene:stol / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_001028554.3 Gene:Cacna2d4 / 319734 MGIID:2442632 Length:1116 Species:Mus musculus


Alignment Length:1246 Identity:362/1246 - (29%)
Similarity:581/1246 - (46%) Gaps:214/1246 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IPHNEVRNWALKFGVDLWEFGRQFTKMNEIKSRFKDND--IEVKRKDGIILLRELAAEVKNFMDF 96
            :|...|:.||..||.:|:....:::....::.::||.:  :::|..||:.|:::.:.:::..:..
Mouse    51 VPLETVKLWADTFGRNLYNTVTRYSGSLLLQKKYKDAEPSLKIKEVDGLELVKKFSEDMETMLRR 115

  Fly    97 KRNAVMRLMDSAEQAALSELEGQGQAESPMGGQQHYDARRINEYNADGKLADGARHMDIRFMRRF 161
            |..||..|:::||:|   :|..:..|....   .:|::..|||.:..|...:......:.....|
Mouse   116 KVEAVESLVEAAEEA---DLNHEFNASLVF---NYYNSVLINEKDDKGNYVELGAEFLLESDAHF 174

  Fly   162 ERLPVNLSLSSILVPHGVDLDEPDVKSALQWSGHLDPLFQNNLEQDPALSWQYFGSSTGFLRRFP 226
            ..|.||:|:||:.:|..|...:||:.:.:..|..|:|:|..|.::||.|:||||||||||.|.:|
Mouse   175 SNLRVNVSMSSVQLPTNVYNKDPDILNGVYMSEALNPVFVENFQRDPTLTWQYFGSSTGFFRIYP 239

  Fly   227 GTAWPPEGSKGSKLIHDFRTHNWFVQAASSPKDIMILLDASSSMTEKSFDLGMATAFNILDTLGE 291
            |..|.|:  :...:..|.|...|::|||:|||||:||:|.|.||......:...|...|||||||
Mouse   240 GIKWMPD--ENGVIAFDCRNRGWYIQAATSPKDIVILVDISGSMKGLRMAIAKHTITTILDTLGE 302

  Fly   292 DDFVNLITFSEVVKTPVPCFKDRMVRATPDNIQEIKSAVKAIKLQDTANFTAGLEYAFSLLHKYN 356
            :||||:|.:::.|....||||..:|:|..||.:..|..|..:.::.....:..|..||.:|.::.
Mouse   303 NDFVNIIAYNDYVHYIEPCFKGILVQADRDNREHFKQLVDELMVKGVGVVSQALIEAFEILKQFQ 367

  Fly   357 QSGAGSQCNQAIMLITESTSESHKDVIKQYNWPHMPVRIFTYLIGSDSGSRSNLHDMACSNKGFF 421
            :|..||.|||||||||:...|.::.|.:.||||...||:||||||.:......:..:||:|||::
Mouse   368 ESKQGSLCNQAIMLITDGAVEDYEPVFETYNWPDRKVRVFTYLIGREVTFADRMKWIACNNKGYY 432

  Fly   422 VQINDYDEARRKVIDYALVMARPMIMYQADHPVHWSPVFVAGKSGGLGRDSEYQRRLVTTVSTPV 486
            .||:...:|:..|::|..|::|||:: ..||.:.|:..::..:   |.........|:|||:.||
Mouse   433 TQISTLADAQESVMEYLHVLSRPMVI-NHDHDIIWTEAYMDSR---LFTSEAQSLMLLTTVAMPV 493

  Fly   487 FDRRNHSVRVANLLGVVGTDVPIEEIRKVIPQHKLGPNGYSFIVDNNGRVLYHPDLRPLGDANQY 551
            |.::|.:.....||||||:||.:.|:.|:.|::|||.:||:|:..|||.:|.|||||||....:.
Mouse   494 FSKKNETRSHGILLGVVGSDVTLRELMKLAPRYKLGVHGYAFLNTNNGYILSHPDLRPLYREGKK 558

  Fly   552 IDQLKPKYASVDITELELPETEFGNNNEPIEINKNLLNEMRGDMIKPKEGETEFTVMNHYDDSKR 616
            : :.||.|.|||::|:|.        .:..||       :|..||..:.|.....|....|..||
Mouse   559 L-RPKPNYNSVDLSEVEW--------EDQAEI-------LRTAMINGETGSHSMDVKVPLDKGKR 607

  Fly   617 VSTRTHRYFYGPIEDTPFTLAIVLPEKYGSHEFVSQQEIRHSRNNVTEYFKGDNWRVHP------ 675
            |...|:.||:..|.||||:|.:||...:|.:..:....:....:::          :||      
Mouse   608 VLFLTNDYFFTDISDTPFSLGVVLTRGHGEYILLGNTSVEEGLHDL----------LHPDLTLAS 662

  Fly   676 DWVYCEYNSVSDLEKERESSGEYSSRDQEPSFGSPEEQVLHFLSRAGRPGWKWMSVRPKSPQPHH 740
            ||:||    ::|::.:.....:.             |.|:.||:                     
Mouse   663 DWIYC----ITDIDPDHRKLSQL-------------EAVVRFLT--------------------- 689

  Fly   741 NMHSGSNGGNAPGSSHFGSQHQSSQGSRKAEPYFCDRALLQSLVRDAMVTDGLDRNTTGSSSG-K 804
                    |..|...                   ||..|::.::.||:||..::...|..:.. .
Mouse   690 --------GVDPDLE-------------------CDEELVREVLFDAVVTAPMEAYWTALALNIS 727

  Fly   805 EDKHPIATLMAILKRQGYQKFVVATSFVATRSGLLR---WIDHVK---RPEDTPEPHFSEDNVRA 863
            |:..|                .|..:|:.||:||||   ::...|   |...|||   .|.::..
Mouse   728 EESEP----------------GVDVAFLGTRAGLLRRSLFVGSEKVSDRKFLTPE---DEASIFT 773

  Fly   864 MD--TSWYKRAIDQHSVEPDSFVYSVPFGSGYAIKSNATLVTASHAIFVEHRGHKAAAGVVGLQF 926
            ||  ..||::|.:|   .|.|||:::.:..|.........|.||.|:.|...|..|.|..||:|.
Mouse   774 MDHFPLWYRQASEQ---PPGSFVFNLRWAEGPDSPGKPVAVRASTAVTVTVDGKTAIAAAVGIQM 835

  Fly   927 QHDSLAKHFINITSACTGMTG-CKRTCASDNLDCYVLDNSGFVIISEEMEHTGKFFGQIDGTIMD 990
            |.|.|.:.|......|..:.| |.::|...:|||:|:||:|||:|||..:..|:..|:.||.:|.
Mouse   836 QADYLQRQFWAAMQQCNAVEGPCLKSCEDTDLDCFVIDNNGFVLISERPQEMGRLLGEADGALMK 900

  Fly   991 SLVQDRIYKRVTVNDYQGVCSDADNPYTAAGGILKP----NRLGSWFFNHLLALSAAWLSLMPAS 1051
            .|:...::.|||:.|||.:|...|:.::||..:..|    ..:..|..:..|.....|       
Mouse   901 QLLSMGVFSRVTMYDYQAMCKPPDHHHSAAESLFSPLSAFLMVARWLLHECLLFLLEW------- 958

  Fly  1052 LRAWPQEEYTYDNEDVVFVDNNYSDEYEFGNENEYNMQVDQEMDEFFTTADVEYTTPPPRQHKPH 1116
             .||                .::.|:   |:|.:....                     ..||..
Mouse   959 -SAW----------------GSWQDK---GSEAKSVFH---------------------HSHKHK 982

  Fly  1117 VGPRFSPDPHNARRCDLRTDLYMLQPERLNQGGQNNPLKGKLTNCHVSGCERPFSVQKIPHSNLI 1181
            ......|       ||....:::.|.......|        :..|  .||::.|.:|:||.|||:
Mouse   983 KQDLLHP-------CDTEYPVFVHQTAIQEANG--------IIEC--GGCQKTFVMQQIPRSNLL 1030

  Fly  1182 LLVVDTLCPCGSKQLDIEPLEEAGVIGACSTRRQGQEQESRRRPKKCINYHPEEIEIQQCGRGST 1246
            |||.|..|.|.:....::...|.....:....|. :.|:.||||..|..:|||| ..|.||..|.
Mouse  1031 LLVTDRTCDCSAHSPILQEATEVKYNASVKCDRM-RSQKPRRRPGSCHAFHPEE-NAQDCGGASD 1093

  Fly  1247 LLHMSGSVIVA 1257
            .|..|..::::
Mouse  1094 TLPSSPLLLLS 1104

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stolNP_001188817.2 VWA_N 130..230 CDD:462464 37/99 (37%)
vWA_VGCC_like 245..428 CDD:238740 77/182 (42%)
PDC2_MCP_like 511..643 CDD:350337 50/131 (38%)
VGCC_alpha2 810..>1048 CDD:462488 76/250 (30%)
Cacna2d4NP_001028554.3 VWA_N 127..243 CDD:462464 42/121 (35%)
vWA_VGCC_like 256..439 CDD:238740 77/182 (42%)
MIDAS-like motif 276..280 2/3 (67%)
HK_sensor <463..516 CDD:365792 18/55 (33%)
HK_sensor 518..631 CDD:365792 48/128 (38%)
VGCC_alpha2 640..1089 CDD:462488 140/612 (23%)

Return to query results.
Submit another query.