DRSC/TRiP Functional Genomics Resources

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Protein Alignment stol and Cacna2d3

DIOPT Version :10

Sequence 1:NP_001188817.2 Gene:stol / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:XP_063131356.1 Gene:Cacna2d3 / 306243 RGDID:631361 Length:1091 Species:Rattus norvegicus


Alignment Length:1289 Identity:373/1289 - (28%)
Similarity:598/1289 - (46%) Gaps:271/1289 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 IFVAFAD---QDEDIPHNEVRNWALKFGVDLWEFGRQFTKMNEIKSRFK--DNDIEVKRKDGIIL 82
            ::.|..|   .::.||.:.|:.||..||.::.....:::....::.::|  :.|:.::..||:.|
  Rat    23 LYAALGDVVRSEQQIPLSVVKLWASAFGGEIKSIAAKYSGSQLLQKKYKEYEKDVAIEEIDGLQL 87

  Fly    83 LRELAAEVKNFMDFKRNAVMRLMDSAEQAALS-ELEGQGQAESPMGGQQHYDARRINEYNADGKL 146
            :::||..::.....|..||.||:::||:|.|. |.:...|.|       :::|..|||.:.||..
  Rat    88 VKKLAKNMEEMFHKKSEAVRRLVEAAEEAHLKHEFDADLQYE-------YFNAVLINERDKDGNF 145

  Fly   147 ADGARHMDIRFMRRFERLPVNLSLSSILVPHGVDLDEPDVKSALQWSGHLDPLFQNNLEQDPALS 211
            .:..:...:.....|..||||:|||.:.||..:...:|.:.:.:.||..|:.:|.:|.::||:|.
  Rat   146 LELGKEFILAPNDHFNNLPVNISLSDVQVPTNMYNKDPAIVNGVYWSESLNKVFVDNFDRDPSLI 210

  Fly   212 WQYFGSSTGFLRRFPGTAWPPEGSKGSKLIHDFRTHNWFVQAASSPKDIMILLDASSSMTEKSFD 276
            ||||||:.||.|::||..|.|:  :...:..|.|...|::|||:||||::||:|.|.||......
  Rat   211 WQYFGSAKGFFRQYPGIKWEPD--ENGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLT 273

  Fly   277 LGMATAFNILDTLGEDDFVNLITFSEVVKTPVPCFKDRMVRATPDNIQEI-----KSAVKAIKLQ 336
            :...|..:||||||:|||.|:||::|.:....||....:|:|...|.:..     |...|.|.:.
  Rat   274 IAKQTVSSILDTLGDDDFFNIITYNEELHYVEPCLNGTLVQADRTNKEHFREHLDKLFAKGIGML 338

  Fly   337 DTANFTAGLEYAFSLLHKYNQSGAGSQCNQAIMLITESTSESHKDVIKQYNWPHMPVRIFTYLIG 401
            |.|     |..||::|..:|.:|.||.|:|||||||:...:::..:..:||||...|||||||||
  Rat   339 DIA-----LNEAFNVLSDFNHTGQGSICSQAIMLITDGAVDTYDTIFAKYNWPERKVRIFTYLIG 398

  Fly   402 SDSGSRSNLHDMACSNKGFFVQINDYDEARRKVIDYALVMARPMIMYQADHPVHWSPVFVAGKSG 466
            .::....||..|||:|||||.||:...:.:..|::|..|::||.::.| :|.|.|:..::     
  Rat   399 REAAFADNLKWMACANKGFFTQISTLADVQENVMEYLHVLSRPKVIDQ-EHDVVWTEAYI----- 457

  Fly   467 GLGRDSEYQRR----------LVTTVSTPVFDRRNHSVRVANLLGVVGTDVPIEEIRKVIPQHKL 521
                ||...:.          |:|||:.|||.::|.:.....||||||||||::|:.|.||::||
  Rat   458 ----DSTLPQAQKLADDQGLVLMTTVAMPVFSKQNETRSKGILLGVVGTDVPVKELLKTIPKYKL 518

  Fly   522 GPNGYSFIVDNNGRVLYHPDLRPLGDANQYIDQLKPKYASVDITELELPETEFGNNNEPIEINKN 586
            |.:||:|.:.|||.:|.||:||||.:..:  .:.||.|:|||::|:|..:.:             
  Rat   519 GIHGYAFAITNNGYILTHPELRPLYEEGK--KRRKPNYSSVDLSEVEWEDRD------------- 568

  Fly   587 LLNEMRGDMIKPKEGETEFTVMNHYDDSKRVSTRTHRYFYGPIEDTPFTLAIVLPEKYGSHEFVS 651
              :.:|..|:..|.|:....|....|..|||...|:.|:|..|:..||:|.:.|...:|.:.|  
  Rat   569 --DVLRNAMVNRKTGKFSMEVKKTVDKGKRVLVMTNDYYYTDIKGAPFSLGVALSRGHGKYFF-- 629

  Fly   652 QQEIRHSRNNVTEYFKGDNWRVHPD------WVYCEYNSVSDLEKERESSGEYSSRDQEPSFGSP 710
                   |.||| ..:|.:...|||      |.||.    :||                      
  Rat   630 -------RGNVT-IEEGLHDLEHPDVSLADEWSYCN----TDL---------------------- 660

  Fly   711 EEQVLHFLSRAGRPGWKWMSVRPKSPQPHHNMHSGSNGGNAPGSSHFGSQHQSSQGSRKAEPYF- 774
                                      .|.|.              |...........:..||.. 
  Rat   661 --------------------------HPEHR--------------HLSQLEAIKLYLKGKEPLLQ 685

  Fly   775 CDRALLQSLVRDAMVTDGLDRNTTGSSSGKEDKHPIATLMAILKRQGYQKFVVATSFVATRSGLL 839
            ||:.|:|.::.||:|:..::...|.              :|:.|.:...| .|..:|:.||:||.
  Rat   686 CDKELIQEVLFDAVVSAPIEAYWTS--------------LALNKSENSDK-GVEVAFLGTRTGLS 735

  Fly   840 RWIDHVKRPEDTPEPHFSEDNVRAMDTS----------WYKRAIDQHSVEPDSFVYSVPFGSGYA 894
            |....|...:.|     ::|.::|.|..          ||:||.:|   .|.|||||:||.:|..
  Rat   736 RINLFVGAEQLT-----NQDFLKARDKENIFNADHFPLWYRRAAEQ---IPGSFVYSIPFSTGTV 792

  Fly   895 IKSNATLVTASHAIFVEHRGHKAAAGVVGLQFQHDSLAKHFINITSACTGMTG-CKRTCASDNLD 958
            .|||  :||||.:|.:...........||:|.:.:...:.|...:..|..:.| |..:|..:.::
  Rat   793 NKSN--VVTASTSIQLLDERKSPVVAAVGIQMKLEFFQRKFWTASRQCASLDGKCSISCDDETVN 855

  Fly   959 CYVLDNSGFVIISEEMEHTGKFFGQIDGTIMDSLVQDRIYKRVTVNDYQGVCSDADNPYTAAGGI 1023
            ||::||:||:::||:...||.|||:::|.:|:.|:....:||:|:.|||.:|........:|.|:
  Rat   856 CYLIDNNGFILVSEDYTQTGDFFGEVEGAVMNKLLTMGSFKRITLYDYQAMCRANKESSDSAHGL 920

  Fly  1024 LKPNR----LGSWFFNHLLALSAAWLSLMPASLRAWPQEEYTYDNEDVVFVDNNYSDEYEFGNEN 1084
            |.|.:    ...|....|:      |.|:..:|.:|...:.|                       
  Rat   921 LDPYKAFLSAAKWIVTELV------LFLVEFNLCSWWHSDMT----------------------- 956

  Fly  1085 EYNMQVDQEMDEFFTTADVEYTTPPPRQHKPHVGPRFSPDPHNARRCDLRTDLYMLQPERLNQGG 1149
                ...|::.:.....|.||             |.|..:         ||              
  Rat   957 ----AKAQKLKQTLEPCDTEY-------------PAFVSE---------RT-------------- 981

  Fly  1150 QNNPLKGKLTNCHVSGCERPFSVQKIPHSNLILLVVDTLCPCGSKQLDIEPLEEAGV---IGACS 1211
                :|....|.....|.:.|.:|:||.|||.::|||:.|.|.|    :.|:..|.:   .....
  Rat   982 ----IKETTGNIACEDCSKSFVIQQIPSSNLFMVVVDSSCLCES----VAPITMAPIEIRYNESL 1038

  Fly  1212 TRRQGQEQESRRRPKKCINYHPEEIEIQQCGRGSTLLHMSGSVIVAHLLMVTVT 1265
            ...:.:.|:.||||:.|..:|||| ..::||..|:|     ...||.||:..|:
  Rat  1039 KCERLKAQKIRRRPESCHGFHPEE-NARECGGASSL-----QAQVALLLLPLVS 1086

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stolNP_001188817.2 VWA_N 130..230 CDD:462464 36/99 (36%)
vWA_VGCC_like 245..428 CDD:238740 80/187 (43%)
PDC2_MCP_like 511..643 CDD:350337 45/131 (34%)
VGCC_alpha2 810..>1048 CDD:462488 75/252 (30%)
Cacna2d3XP_063131356.1 None

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