DRSC/TRiP Functional Genomics Resources

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Protein Alignment stol and Cacna2d1

DIOPT Version :10

Sequence 1:NP_001188817.2 Gene:stol / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:XP_011248046.1 Gene:Cacna2d1 / 12293 MGIID:88295 Length:1110 Species:Mus musculus


Alignment Length:1315 Identity:321/1315 - (24%)
Similarity:551/1315 - (41%) Gaps:310/1315 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CFVAIVLGVLIFKMHIFVAFADQDEDIPHNEVRNWALKFGVDLWEFGRQ---FTKMNEIKSRFKD 69
            |.:|:.|  .:|:..:....:::....|.. :::|..|...||....:.   .|::.:|..::: 
Mouse     5 CLLALTL--TLFQSGLIGPSSEEPFPSPVT-IKSWVDKMQEDLVTLAKTASGVTQLADIYEKYQ- 65

  Fly    70 NDIEVKRKDGIILLRELAA-EVKNFMDFKRNAVMRLMDSAEQAALSELEGQGQAESPMGGQQHYD 133
             |:.....:....|.|:|| :::..:..:..|::||...||           :.::....::.:.
Mouse    66 -DLYTVEPNNARQLVEIAARDIEKLLSNRSKALVRLAMEAE-----------KVQAAHQWREDFA 118

  Fly   134 ARRINEYNADGKL-------ADGARHM------DIRFMRRFERLPVNLSLSSILVPHGVDLDEPD 185
            :..:..|||...|       ..|::.:      |..|.|:     ::...:::.:|..:......
Mouse   119 SNEVVYYNAKDDLDPERNESEPGSQRIKPVFIEDANFGRQ-----ISYQHAAVHIPTDIYEGSTI 178

  Fly   186 VKSALQWSGHLDPLFQNNLEQDPALSWQYFGSSTGFLRRFPGTAWPPEGSKGSKL-IHDFRTHNW 249
            |.:.|.|:..||.:|:.|.::||.|.||.|||:||..|.:|.:.|.......:|: ::|.|...|
Mouse   179 VLNELNWTSALDEVFKRNRDEDPTLLWQVFGSATGLARYYPASPWVDNSRTPNKIDLYDVRRRPW 243

  Fly   250 FVQAASSPKDIMILLDASSSMTEKSFDLGMATAFNILDTLGEDDFVNLITFSEVVKTPVPCFKDR 314
            ::|.|:||||::||:|.|.|::..:..|...:...:|:||.:|||||:.:|:...: .|.||: .
Mouse   244 YIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDFVNVASFNSNAQ-DVSCFQ-H 306

  Fly   315 MVRATPDNIQEIKSAVKAIKLQDTANFTAGLEYAFSLLHKYNQSGAGSQCNQAIMLITESTSESH 379
            :|:|...|.:.:|.||..|..:...::..|..:||..|..||.|.|  .||:.|||.|:...|..
Mouse   307 LVQANVRNKKVLKDAVNNITAKGITDYKKGFSFAFEQLLNYNVSRA--NCNKIIMLFTDGGEERA 369

  Fly   380 KDVIKQYNWPHMPVRIFTYLIGSDSGSRSNLHDMACSNKGFFVQINDYDEARRKVIDYALVMARP 444
            :::..:|| ....||:||:.:|..:..|..:..|||.|||::.:|......|....:|..|:.||
Mouse   370 QEIFAKYN-KDKKVRVFTFSVGQHNYDRGPIQWMACENKGYYYEIPSIGAIRINTQEYLDVLGRP 433

  Fly   445 MIMY-QADHPVHWSPVFVAGKSGGLGRDSEYQRRLVTTVSTPVFDRRNHSVRVANL-----LGVV 503
            |::. .....|.|:.|::.....|          ||.|.:.|||:....|....||     |||:
Mouse   434 MVLAGDKAKQVQWTNVYLDALELG----------LVITGTLPVFNVTGQSENKTNLKNQLILGVM 488

  Fly   504 GTDVPIEEIRKVIPQHKLGPNGYSFIVDNNGRVLYHPDLRPLGDANQYIDQLKPKYASVDITELE 568
            |.||.:|:|:::.|:..|.||||.|.:|.||.||.||:|:|           ||  ..|.|..:.
Mouse   489 GVDVSLEDIKRLTPRFTLCPNGYYFAIDPNGYVLLHPNLQP-----------KP--IGVGIPTIN 540

  Fly   569 L----PETEFGNNNEPI-------EINKNLLNEMRGDMIKPKEGETEFTVMNHYDDSKRVSTRTH 622
            |    |..:...:.||:       |:...:..|:|..||..:.||..|..:....|.:.:.....
Mouse   541 LRKRRPNVQNPKSQEPVTLDFLDAELENEIKVEIRNKMIDGESGEKTFRTLVKSQDERYIDKGNR 605

  Fly   623 RYFYGPIEDTPFTLAIVLPE------KYGSHEFVSQQEIRHSRNNVTEYFKGDNWRVHPDWVYCE 681
            .|.:.|:..|.::||:|||.      |....|.::|...:..:...:|..|.||:          
Mouse   606 TYTWTPVNGTDYSLALVLPTYSFYYIKAKLEETITQARSKKGKMKDSETLKPDNF---------- 660

  Fly   682 YNSVSDLEKERESSG-------EYSSRDQEPSFGSPEEQVLHFLSRAGRPGWKWMSVRPKSPQPH 739
                       |.||       ||.: |.:|| .:..|.:|:|.....|          |:|   
Mouse   661 -----------EESGYTFIAPREYCN-DLKPS-DNNTEFLLNFNEFIDR----------KTP--- 699

  Fly   740 HNMHSGSNGGNAPGSSHFGSQHQSSQGSRKAEPYFCDRALLQSLVRDAMVTDGLDRNTTGSSSGK 804
                      |.|.                     |:..|:..::.||..|:.|.:|....    
Mouse   700 ----------NNPS---------------------CNTDLINRILLDAGFTNELVQNYWSK---- 729

  Fly   805 EDKHPIATLMAILKRQGYQKFV--VATSFVATRSGLLRWIDHVKRPEDTPEPHFSEDNVRAMDTS 867
                              ||.:  |...||.|..|:.|     ..|::..|..  ::|....:.|
Mouse   730 ------------------QKNIKGVKARFVVTDGGITR-----VYPKEAGENW--QENPETYEDS 769

  Fly   868 WYKRAIDQHSVEPDSFVYSVPF--GSGYAIKSNATLVTASHAIFVEHRGHKAAAGVVGLQFQHDS 930
            :|||::|.     |::|::.|:  .||.....:..:|:.:..::::.:..|.|  |||::...:|
Mouse   770 FYKRSLDN-----DNYVFTAPYFNKSGPGAYESGIMVSKAVELYIQGKLLKPA--VVGIKIDVNS 827

  Fly   931 LAKHF--INITSACTG-MTGCKRTCASDNLDCYVLDNSGFVIISEEMEHT---GKFFGQIDGTIM 989
            ..::|  .:|...|.| :..|||.  ||.:||.:||:.||::::...::|   |:|||:||.::|
Mouse   828 WIENFTKTSIRDPCAGPVCDCKRN--SDVMDCVILDDGGFLLMANHDDYTNQIGRFFGEIDPSMM 890

  Fly   990 DSLVQDRIYKRVTVNDYQGVCSDADNPYTAAG-------GILKPNRLGSWFFNHLLALSAAW--- 1044
            ..||...:|......|||.||.....|...||       .|....::|.|      |.:|||   
Mouse   891 RHLVNISLYAFNKSYDYQSVCDPGAAPKQGAGHRSAYVPSIADILQIGWW------ATAAAWSIL 949

  Fly  1045 ----LSL-MPASLRAWPQEEYTYDNEDVVFVDNNYSDEYEFGNENEYNMQVDQEMDEFFTTADVE 1104
                ||| .|..|.|                                   |:.|.|:|  ||.: 
Mouse   950 QQLLLSLTFPRLLEA-----------------------------------VEMEEDDF--TASL- 976

  Fly  1105 YTTPPPRQHKPHVGPRFSPDPHNARRCDLRTDLYMLQPERLNQGGQNNPLKGKLTNCHVSGCERP 1169
                                  :.:.|......|..:.:..:..|        |.:|  ..|.|.
Mouse   977 ----------------------SKQSCITEQTQYFFKNDTKSFSG--------LLDC--GNCSRI 1009

  Fly  1170 FSVQKIPHSNLILLVVDT--LCPCGSKQLDIEPLEEAGVIGACSTRRQGQEQESRRRPKKCINYH 1232
            |.|:|:.::||:.::|::  .|||.::.| ::..:.:.....|...:|   ...|:.|..|.:.:
Mouse  1010 FHVEKLMNTNLVFIMVESKGTCPCDTRLL-MQAEQTSDGPDPCDMVKQ---PRYRKGPDVCFDNN 1070

  Fly  1233 PEEIEIQQCGRGSTL 1247
            ..| :...||..|.|
Mouse  1071 VLE-DYTDCGGVSGL 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stolNP_001188817.2 VWA_N 130..230 CDD:462464 28/112 (25%)
vWA_VGCC_like 245..428 CDD:238740 63/182 (35%)
PDC2_MCP_like 511..643 CDD:350337 42/148 (28%)
VGCC_alpha2 810..>1048 CDD:462488 72/262 (27%)
Cacna2d1XP_011248046.1 VWA_N 104..223 CDD:462464 30/134 (22%)
vWA_VGCC_like 239..417 CDD:238740 63/182 (35%)
dCache_1 <435..>529 CDD:460673 36/103 (35%)
VGCC_alpha2 651..1079 CDD:462488 131/613 (21%)

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