DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4587 and cacna2d4

DIOPT Version :9

Sequence 1:NP_001188817.2 Gene:CG4587 / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:XP_031754464.1 Gene:cacna2d4 / 100488361 XenbaseID:XB-GENE-991123 Length:1121 Species:Xenopus tropicalis


Alignment Length:1302 Identity:362/1302 - (27%)
Similarity:591/1302 - (45%) Gaps:274/1302 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IPHNEVRNWALKFGVDLWEFGRQFTKMNEIKSRFKDND--IEVKRKDGIILLRELAAEVKNFMDF 96
            |..:.|:.||..||.:::....:::....::.::||.:  :.::..||:.|:::.:.|::|.:..
 Frog    21 ISTDTVKIWADAFGGEVYSLVTRYSGSLLLQKKYKDVEPTLSIEEVDGLELVKKFSEEMENMLRR 85

  Fly    97 KRNAVMRLMDSAEQAAL-----SELEGQGQAESPMGGQQHYDARRINEYNADGKLADGARHMDIR 156
            |..||.:|:::||.|.|     :.||           .::|::.||||.:.:....:......:.
 Frog    86 KVEAVEKLVEAAEDADLHHEFNTSLE-----------FEYYNSVRINEKDENDNYVELGSEFILE 139

  Fly   157 FMRRFERLPVNLSLSSILVPHGVDLDEPDVKSALQWSGHLDPLFQNNLEQDPALSWQYFGSSTGF 221
            ....|..|.||.|||:|.:|..|...:|.:.:.:..|..|:|:|.:|.::||.|:|||||||:||
 Frog   140 TNEHFNNLMVNTSLSNIQLPTNVYNKDPSILNGVYMSEALNPIFVDNFQRDPTLTWQYFGSSSGF 204

  Fly   222 LRRFPGTAWPPEGSKGSKLIHDFRTHNWFVQAASSPKDIMILLDASSSMTEKSFDLGMATAFNIL 286
            .|.:||..|.|:  :...:..|.|...|::|||:|||||:|::|.|.||......:...|...:|
 Frog   205 FRLYPGIKWVPD--ENGVISFDCRNRGWYIQAATSPKDIVIVVDISGSMKGLRMTIAKHTISTLL 267

  Fly   287 DTLGEDDFVNLITFSEVVKTPVPCFKDRMVRATPDNIQEIKSAVKAIKLQDTANFTAGLEYAFSL 351
            |||||:||||:|.:::.|....||||..:|:|..||.:..|..|..:..:........|..||.:
 Frog   268 DTLGENDFVNIIAYNDYVHYIEPCFKGILVQADRDNREHFKQLVDELHAKGVGTVNKALIEAFKI 332

  Fly   352 LHKYNQSGAGSQCNQAIMLITESTSESHKDVIKQYNWPHMPVRIFTYLIGSDSGSRSNLHDMACS 416
            |.::.::|.|..|||||||||:...|.::.|.::||:|...||:||||||.:....||:..:||:
 Frog   333 LKEFREAGQGGLCNQAIMLITDGAVEEYEPVFEKYNFPDRKVRLFTYLIGREVTFSSNVKWIACN 397

  Fly   417 NKGFFVQINDYDEARRKVIDYALVMARPMIMYQADHPVHWSPVFVAG---KSGGLGRDSEYQRRL 478
            |||::.||:...:.:..|::|..|::|||:: ..||.:.|:..::..   :|..|.........|
 Frog   398 NKGYYTQISTLADVQENVMEYLHVLSRPMVI-NHDHDIIWTEAYMDSALPQSEELFASQAQSLLL 461

  Fly   479 VTTVSTPVFDRRNHSVRVANLLGVVGTDVPIEEIRKVIPQHKLGPNGYSFIVDNNGRVLYHPDLR 543
            :|||:.|||.::|.:.....||||||:|||:.|:.|:.|::|||.:||:|:..|||.:|.|||||
 Frog   462 MTTVAMPVFSKKNETRSEGILLGVVGSDVPLRELLKLAPRYKLGVHGYAFLNTNNGYILSHPDLR 526

  Fly   544 PLGDANQYIDQLKPKYASVDITELELPETEFGNNNEPIEINKNLLNEMRGDMIKPKEGETEFTVM 608
            ||....:.: :.||.|.|||::|:|..:.:        ||       :|..||..:.|.....|.
 Frog   527 PLYKEGKKL-RPKPNYNSVDLSEVEWEDKD--------EI-------LRTAMINGETGSLTMDVK 575

  Fly   609 NHYDDSKRVSTRTHRYFYGPIEDTPFTLAIVLPEKYGSHEFVSQQEIRHSRNNVTEYFKGDNWRV 673
            ...|..|||...|..|||..|:||||:|.:||...:|.:..:.........:::          :
 Frog   576 VPVDKGKRVLFLTSDYFYTHIDDTPFSLGVVLSRGHGEYILIGNTSAEEGLHDL----------L 630

  Fly   674 HPD------WVYCEYNSVSDLEKERESSGEYSSRDQEPSFGSPEEQVLHFLSRAGRPGWKWMSVR 732
            |||      |:||    |:|::.:.....:.             :.|..||:             
 Frog   631 HPDLTVANEWIYC----VTDIDPDHRKLSQL-------------QAVKKFLT------------- 665

  Fly   733 PKSPQPHHNMHSGSNGGNAPGSSHFGSQHQSSQGSRKAEPYFCDRALLQSLVRDAMVTDGLDRNT 797
                            |..|...                   ||..|||.::.||:||..|:...
 Frog   666 ----------------GEDPDLE-------------------CDEELLQEVLFDAVVTAPLEAYW 695

  Fly   798 TGSSSGKEDKHPIATLMAILKRQGYQKFVVATSFVATRSGLLR---WIDHVKRPEDTPEPHFSED 859
            |          .:|..|: .|.:|     :..:|:.||:||:|   ::.:.|........:..::
 Frog   696 T----------QLALNMS-SKDEG-----IEVAFLGTRAGLMRKNQFVGNEKLTNKKFLQYEDKE 744

  Fly   860 NVRAMD--TSWYKRAIDQHSVEPDSFVYSVPFGS-------------------GYAIKSNATL-- 901
            ::..||  ..||:||.:..:   .||||.:|...                   |...:||..|  
 Frog   745 SIFTMDHFPLWYRRAAEHPA---GSFVYHIPTDDNPDHNPSDNDISEPPGQPLGSDEQSNKELGR 806

  Fly   902 ----VTASHAIFVEHRGHKAAAGVVGLQFQHDSLAKHF------INITSACTGMTG-CKRTCASD 955
                ||.|.||.|......|.|..:|:|.:...|...|      .|.|. |..:.| |..:|..:
 Frog   807 RLEVVTVSTAISVTVHSKTAIAAAIGVQMKLSLLESVFWKTMRQPNDTD-CRNVEGLCPLSCQDE 870

  Fly   956 NLDCYVLDNSGFVIISEEMEHTGKFFGQIDGTIMDSLVQDRIYKRVTVNDYQGVCSDADNPYTAA 1020
            .|.||::||:||::|:::.:.||.|.|:::|:::..|:...::::|.:.|||.:|....:.::.|
 Frog   871 TLQCYLVDNNGFIVIAKDQDKTGVFLGEVEGSLISQLLNMGVFRQVKLYDYQAMCKHPYHYHSGA 935

  Fly  1021 GGILKP----NRLGSWFFNHLL------ALSAAWLSLMPASLRAWPQEEYTYDNEDVVFVDNNYS 1075
            ..:|.|    .....||..:|:      :|...|.|                        ||...
 Frog   936 RNLLNPLVALMSAAQWFIGNLVLFFLEFSLCPFWAS------------------------DNTVQ 976

  Fly  1076 DEYEFGNENEYNMQVDQEMDEFFTTADVEYTTPPPRQHKPHVGPRFSPDPHNARRCDLRTDLYML 1140
            .:..|.:.:                           :||.|  ....|       ||.....::.
 Frog   977 AKSFFHHSH---------------------------KHKKH--DMLQP-------CDTEYPAFIH 1005

  Fly  1141 QPERLNQGGQNNPLKGKLTNCHVSGCERPFSVQKIPHSNLILLVVDTLCPCGS-KQLDIEPLE-- 1202
            :.......|        |.||  ..|::.|.:|::.:|||:|||.|..|.|.: ..:.:...|  
 Frog  1006 EASIQEANG--------LINC--GECQKMFVLQQVMNSNLLLLVTDATCDCSTFPPVSLRAKEVK 1060

  Fly  1203 -EAGVIGACSTRRQGQEQESRRRPKKCINYHPEEIEIQQCGRGSTLLHMSGSVIVAHLLMVTVTF 1266
             .|.|  .|...|   .|:.||||:.|..:|||| ..|.||      .:||......||...:|.
 Frog  1061 YNASV--KCDRMR---SQKLRRRPQSCHAFHPEE-NAQDCG------GVSGITPTLTLLFAALTV 1113

  Fly  1267 VL 1268
            .|
 Frog  1114 SL 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4587NP_001188817.2 VWA_N 108..230 CDD:285584 42/126 (33%)
vWA_VGCC_like 245..428 CDD:238740 75/182 (41%)
Cache_1 456..544 CDD:280839 37/90 (41%)
VGCC_alpha2 590..>647 CDD:285647 22/56 (39%)
cacna2d4XP_031754464.1 VWA_N 97..213 CDD:400621 42/126 (33%)
vWA_VGCC_like 226..409 CDD:238740 75/182 (41%)
HK_sensor <433..492 CDD:365792 19/58 (33%)
PDC2_MCP_like 494..609 CDD:350337 51/130 (39%)
VGCC_alpha2 664..1095 CDD:400667 127/574 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5180
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H26544
Inparanoid 1 1.050 571 1.000 Inparanoid score I1042
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110668at33208
OrthoFinder 1 1.000 - - FOG0000496
OrthoInspector 1 1.000 - - mtm9510
Panther 1 1.100 - - LDO PTHR10166
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X365
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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