DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4587 and cacna2d3

DIOPT Version :9

Sequence 1:NP_001188817.2 Gene:CG4587 / 34921 FlyBaseID:FBgn0028863 Length:1271 Species:Drosophila melanogaster
Sequence 2:XP_017213852.1 Gene:cacna2d3 / 100148645 ZFINID:ZDB-GENE-030616-133 Length:1083 Species:Danio rerio


Alignment Length:1257 Identity:370/1257 - (29%)
Similarity:593/1257 - (47%) Gaps:231/1257 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DIPHNEVRNWALKFGVDLWEFGRQFTKMNEIKSRFK--DNDIEVKRKDGIILLRELAAEVKNFMD 95
            :||.:.|:.||..||.::.....:::....::.::|  :..:.::..||..|::.||..::....
Zfish    31 EIPLSVVKLWASAFGGEIKSIASKYSGSQLLQKKYKEYEKSVRIEEIDGAKLVKNLAQNMEEMFR 95

  Fly    96 FKRNAVMRLMDSAEQAALSELEGQGQAESPMGGQQHYDARRINEYNADGKLADGARHMDIRFMRR 160
            .|..|..||:::||:|.|.      ..|:|....::::|..|||.:.||...:......:.....
Zfish    96 KKAEATRRLVEAAEEAHLQ------HEENPDLQYEYFNAVLINEVDEDGNSVELGGEFLLEPNDH 154

  Fly   161 FERLPVNLSLSSILVPHGVDLDEPDVKSALQWSGHLDPLFQNNLEQDPALSWQYFGSSTGFLRRF 225
            |..|.||||||.:.||..:...:||:.:.:.||..|:.:|.:|..:||.|.||||||:.||.|::
Zfish   155 FNNLSVNLSLSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVDNFRRDPTLIWQYFGSAKGFFRQY 219

  Fly   226 PGTAWPPEGSKGSKLIHDFRTHNWFVQAASSPKDIMILLDASSSMTEKSFDLGMATAFNILDTLG 290
            ||..|.|:  :...:..|.|...|::|||:||||::||:|.|.||......:...|..:||||||
Zfish   220 PGVKWYPD--EHGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVASILDTLG 282

  Fly   291 EDDFVNLITFSEVVKTPVPCFKDRMVRATPDNIQEIKSAVKAIKLQDTANFTAGLEYAFSLLHKY 355
            :|||.|:|.:::.:....||....:|:|...|....|..:..:..:........|..||::|::.
Zfish   283 DDDFFNIIAYNQEIHYVEPCLNGTLVQADSTNKDHFKEHLDKLFAKGIGLLGNALSEAFTILNEI 347

  Fly   356 NQSGAGSQCNQAIMLITESTSESHKDVIKQYNWPHMPVRIFTYLIGSDSGSRSNLHDMACSNKGF 420
            ||:|.||.|:|||||||:..:|.:.||..:||||...||||.||||.:|....||..|||:|||:
Zfish   348 NQTGRGSSCSQAIMLITDGATEMYDDVFAKYNWPERKVRIFPYLIGRESAFADNLKWMACANKGY 412

  Fly   421 FVQINDYDEARRKVIDYALVMARPMIMYQADHPVHWSPVFV------AGKSGGLGRDSEYQRRLV 479
            |.||:...:.:..|:.|..||:||.:: ..:|...|:..:|      |.|..|..:..    ..:
Zfish   413 FSQISTLADVQENVMRYLHVMSRPKVI-DHEHDTVWTEAYVDSALAQAHKQLGENKGP----NPM 472

  Fly   480 TTVSTPVFDRRNHSVRVANLLGVVGTDVPIEEIRKVIPQHKLGPNGYSFIVDNNGRVLYHPDLRP 544
            |||:.|||..:|.:.....||||.|||:||:|:.||||:||||.:||:|.:.:||.:|.||||||
Zfish   473 TTVAMPVFSTKNETKNQGILLGVAGTDIPIQELMKVIPKHKLGIHGYAFAITSNGYLLLHPDLRP 537

  Fly   545 LGDANQYIDQLKPKYASVDITELELPETEFGNNNEPIEINKNLLNEMRGDMIKPKEGETEFTVMN 609
            |....|  .:.||.|:|||::|:|..:||               :.:|..|:..|.|.....|..
Zfish   538 LYQEGQ--KRKKPSYSSVDLSEVEWEDTE---------------DVLRTAMVNRKTGTFSMEVKR 585

  Fly   610 HYDDSKRVSTRTHRYFYGPIEDTPFTLAIVLPEKYGSHEFVSQQEIRHSRNNVTEYFKGDNWRVH 674
            ..|..|||.|..:.|:|..|:.|||::.:.|...:|.:                 :|||:     
Zfish   586 TVDKGKRVLTMHNDYYYTDIKGTPFSVGVALSRGHGKY-----------------FFKGN----- 628

  Fly   675 PDWVYCEYNSVSDLEKERESSGEYSSRDQEPSFGSPEEQVLHFLSRAGRPGWKWMSVRPKSPQPH 739
               |..| ..:.|||              :|.....:|             |.:.:    :.:.|
Zfish   629 ---VSLE-AGLHDLE--------------QPDVALADE-------------WTYCT----TEEHH 658

  Fly   740 HNMHSGSNGGNAPGSSHFGSQHQSSQ---GSRKAEPYF-CDRALLQSLVRDAMVTDGLDRNTTGS 800
            .:.|.              :|.|:.:   .|||  |:| |||.|:|.::.||:||..::...|| 
Zfish   659 EHRHL--------------TQVQAIKIYMTSRK--PHFKCDRELIQQVLFDAVVTAPVEAYWTG- 706

  Fly   801 SSGKEDKHPIATLMAILKRQGYQKFVVATSFVATRSGLLRWIDHVKRPEDTPEPHFSEDNVRAMD 865
                         :|:.|.:...| .|..:|:.||:||.|....|     .||...:.|.:.|.|
Zfish   707 -------------LALNKSENSDK-GVEIAFLGTRTGLSRTNLFV-----VPEQLTNRDFLTAED 752

  Fly   866 TS----------WYKRAIDQHSVEPDSFVYSVPFGSGYAIKSNATLVTASHAIFVEHRGHKAAAG 920
            ..          |||||.:|   .|.:||||:||.||   ..|.::|.||.||.:..........
Zfish   753 KEGVFNADHFPLWYKRAAEQ---VPGTFVYSIPFSSG---GENKSVVLASTAIQLLDDRKSPIVA 811

  Fly   921 VVGLQFQHDSLAKHFINITSACTGMTG-CKRTCASDNLDCYVLDNSGFVIISEEMEHTGKFFGQI 984
            .||:|.:.:...:.|...:..|..:.| |..:|.::::.||::||:||:::||:...|..|||::
Zfish   812 AVGIQMKLEFFQRKFWTASRQCNALDGKCTISCDNEDIKCYLIDNNGFILVSEDTSQTNLFFGKV 876

  Fly   985 DGTIMDSLVQDRIYKRVTVNDYQGVCSDADNPYTAAGGILKPNRLGSWFFNHLLALSAAWLSLMP 1049
            :|.:|:.|:....:|::.:.|||.:|.:......:|..:|.|.....|....|:      :.|:.
Zfish   877 EGAVMNKLLLMGSFKKINLYDYQALCKEYAGSSDSARTLLDPFTTVKWLLTELV------IFLLE 935

  Fly  1050 ASLRAWPQEEYTYDNEDVVFVDNNYSDEYEFGNENEYNMQVDQEMDEFFTTADVEYTTPPPRQHK 1114
            .:|.:|    :..|:                      .::..:.........|.||         
Zfish   936 FNLYSW----WNCDS----------------------TVKAQRSQRTMMVPCDTEY--------- 965

  Fly  1115 PHVGPRFSPDPHNARRCDLRTDLYMLQPERLNQGGQNNPLKGKLTNCHVSGCERPFSVQKIPHSN 1179
                |.|..:         ||                  :|....|...:||.|.|.:|:||.||
Zfish   966 ----PAFVSE---------RT------------------IKETTGNIDCNGCIRTFVIQQIPSSN 999

  Fly  1180 LILLVVDTLCPCGSK-QLDIEPLEEAGVIGACSTRRQGQE-QESRRRPKKCINYHPEEIEIQQCG 1242
            |.::||:..|.|||. .:.:||:|   :|...|.:....: |:.||||:.|..:||||..: :||
Zfish  1000 LFMVVVENKCDCGSALPVTMEPIE---IIYNESLKCDRLKFQKDRRRPQSCHPFHPEENAV-ECG 1060

  Fly  1243 RGSTLLHMSGSVIVAHL-LMVT 1263
            ..:.|.....::::..| ||::
Zfish  1061 SANALSFPLVAILIPALSLMIS 1082

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4587NP_001188817.2 VWA_N 108..230 CDD:285584 43/121 (36%)
vWA_VGCC_like 245..428 CDD:238740 77/182 (42%)
Cache_1 456..544 CDD:280839 40/93 (43%)
VGCC_alpha2 590..>647 CDD:285647 18/56 (32%)
cacna2d3XP_017213852.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6280
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 572 1.000 Inparanoid score I1017
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110668at33208
OrthoFinder 1 1.000 - - FOG0000496
OrthoInspector 1 1.000 - - mtm6553
orthoMCL 1 0.900 - - OOG6_103783
Panther 1 1.100 - - O PTHR10166
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X365
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.970

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