Sequence 1: | NP_001285960.1 | Gene: | CG18480 / 34920 | FlyBaseID: | FBgn0028518 | Length: | 550 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016875337.1 | Gene: | LRTM2 / 654429 | HGNCID: | 32443 | Length: | 427 | Species: | Homo sapiens |
Alignment Length: | 328 | Identity: | 88/328 - (26%) |
---|---|---|---|
Similarity: | 118/328 - (35%) | Gaps: | 81/328 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MALQCVTKPKMWLGLKQILLYVGLLLCVLLQVCRSKTQSQMFCPTVCHCDLHAQRNRAVCSAKRL 65
Fly 66 ISANIEIPTTVELLDLSYNDITTIDDDSFKTTIHLLNLTLAHNAIHTLYGDAFVELTRLRYLDLS 130
Fly 131 YNRLEQIDEHILESNNQLIHLNLEGNKLSTLGKGPILRSPSLRSLNLRNSQVNQLGTQLLSALPQ 195
Fly 196 LRQLDLAQNLLLTLSPGDFHAPRNLASLNVEENPFNCD------------------------RAL 236
Fly 237 AKVATGLRQRGVAIFMSN-CMEEEVQDHQDDA----------EAVNFPNKNEKFESMEYLEPSTR 290
Fly 291 GPQ 293 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG18480 | NP_001285960.1 | LRR_8 | 74..134 | CDD:290566 | 20/59 (34%) |
LRR_RI | <76..230 | CDD:238064 | 51/153 (33%) | ||
leucine-rich repeat | 76..99 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 100..123 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 122..182 | CDD:290566 | 20/59 (34%) | ||
leucine-rich repeat | 124..147 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 148..171 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 170..230 | CDD:290566 | 22/59 (37%) | ||
leucine-rich repeat | 172..195 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 196..219 | CDD:275380 | 8/22 (36%) | ||
LRTM2 | XP_016875337.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |