back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG18480 and chp

DIOPT Version :10

Sequence 1:	NP_609761.1	Gene:	CG18480 / 34920	FlyBaseID:	FBgn0028518	Length:	550	Species:	Drosophila melanogaster
Sequence 2:	NP_001263137.1	Gene:	chp / 43690	FlyBaseID:	FBgn0267435	Length:	1338	Species:	Drosophila melanogaster

Alignment Length:	157	Identity:	47/157 - (29%)
Similarity:	75/157 - (47%)	Gaps:	8/157 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly    74 TTVELLDLSYNDITTIDDDSFKTTIHLLNLTLAHNAIH-----TLYGDAFVELTRLRYLDLSYNR 133
            |:::.||.|.|.|:::.|.||....:|..|.|..|.|.     |..||..   ::|..:.|.:|.
  Fly   523 TSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIH---SKLEEISLRFNH 584

  Fly   134 LEQIDEHILESNNQLIHLNLEGNKLSTLGKGPILRSPSLRSLNLRNSQVNQLGTQLLSALPQLRQ 198
            |..|.:|.......|..|:|:.||:..:.:...:....|..|:||.:::|.|..:....||:|..
  Fly   585 LTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEI 649

  Fly   199 LDLAQNLLLTLSPGDFHAPRNLASLNV 225
            ||:|.|.|...:...|.....|::|||
  Fly   650 LDMAFNQLPNFNFDYFDQVGTLSNLNV 676

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.