Protein Alignment CG18480 and ltl

DIOPT Version :10

• Sequence 1: NP_609761.1
• Gene: CG18480 / 34920
• FlyBaseID: FBgn0028518
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_729265.1
• Gene: ltl / 38845
• FlyBaseID: FBgn0268063
• Length: 817
• Species: Drosophila melanogaster
• Alignment Length: 298
• Identity: 80/298 - (26%)
• Similarity: 119/298 - (39%)
• Gaps: 62/298 - (20%)

  Fly    33 CRSKTQSQMFCPTVCHCDLHAQRNRAVCSAKRLISAN-----IEIPTTVEL--------LDLSYN 84
            |......||.|..:      ...|.::....:|.:||     ||..:..||        |.||.|
  Fly   294 CSKVETLQMGCNHI------KSLNSSLLPILKLKNANFSFNDIEEFSMAELHGLRSLKTLQLSSN 352

  Fly    85 DI-TTIDDDSFKTTIHLLNLTLAHNAIHTLYGDAFVELTRLRYLDLSYNRLEQIDEHILESNNQL 148
            .| ..:.|......:.|:||.|.:|.|.:|.| |...|..||.|:|:.||||.:.....:...:|
  Fly   353 RIQRLLPDPRGVQELMLVNLDLDNNRIDSLNG-ALAGLGNLRILNLAGNRLEHLQVGDFDGMIRL 416

  Fly   149 IHLNLEGNKLSTLGKGPILRSPSLRSLNLRNSQVNQLGTQLLSALPQLRQLDLAQNLLLTLSP-- 211
            ..|:|.||:|:.|....:...|||:.|.:..:.:.:| .|....||.|.|.:|..|.:.|:|.
  Fly   417 DILDLTGNQLAELKPLEMTLLPSLKILKVAYNNITKL-EQDFKGLPVLCQANLTNNQISTISSEL 480

  Fly   212 ------GDFHAPRNLASLNVEENPFNCD-------RALAKVATGLRQRGVAIFMSNCMEEEVQDH 263
                  .:.:.|..| .:::::||..||       |.:|.....:|.|      |.|.|
  Fly   481 VTNTRCKNHNVPGKL-EIHLDDNPIMCDVGLNELCRLMAVQEARIRGR------SQCFE------ 532

  Fly   264 QDDAEA---------VNFP--NKNEKFESMEYLEPSTR 290
             :|.|.         ||.|  ..|.|....|..:|..|
  Fly   533 -NDQEVCTVLPMLYNVNLPIMVTNLKLTGREVPKPMVR 569

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18480	NP_609761.1	LRR	<66..>230	CDD:443914	54/185 (29%)
		leucine-rich repeat	76..99	CDD:275380	8/31 (26%)
		leucine-rich repeat	100..123	CDD:275380	10/22 (45%)
		leucine-rich repeat	124..147	CDD:275380	8/22 (36%)
		leucine-rich repeat	148..171	CDD:275380	7/22 (32%)
		leucine-rich repeat	172..195	CDD:275380	5/22 (23%)
		leucine-rich repeat	196..219	CDD:275380	7/30 (23%)
ltl	NP_729265.1	LRR	65..476	CDD:443914	55/189 (29%)
		leucine-rich repeat	65..86	CDD:275380
		leucine-rich repeat	87..110	CDD:275380
		leucine-rich repeat	111..134	CDD:275380
		leucine-rich repeat	135..158	CDD:275380
		leucine-rich repeat	159..180	CDD:275380
		leucine-rich repeat	181..203	CDD:275380
		leucine-rich repeat	204..226	CDD:275380
		leucine-rich repeat	227..249	CDD:275380
		leucine-rich repeat	250..272	CDD:275380
		leucine-rich repeat	273..296	CDD:275380	1/1 (100%)
		leucine-rich repeat	297..315	CDD:275380	4/23 (17%)
		leucine-rich repeat	320..335	CDD:275378	5/14 (36%)
		leucine-rich repeat	344..366	CDD:275380	6/21 (29%)
		leucine-rich repeat	367..391	CDD:275380	10/24 (42%)
		leucine-rich repeat	392..415	CDD:275380	8/22 (36%)
		leucine-rich repeat	416..439	CDD:275380	7/22 (32%)
		leucine-rich repeat	440..462	CDD:275380	5/22 (23%)
		leucine-rich repeat	463..483	CDD:275380	6/19 (32%)