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Protein Alignment CG18480 and swi2

DIOPT Version :9

Sequence 1:	NP_001285960.1	Gene:	CG18480 / 34920	FlyBaseID:	FBgn0028518	Length:	550	Species:	Drosophila melanogaster
Sequence 2:	NP_611247.3	Gene:	swi2 / 37010	FlyBaseID:	FBgn0034262	Length:	499	Species:	Drosophila melanogaster

Alignment Length:	128	Identity:	31/128 - (24%)
Similarity:	46/128 - (35%)	Gaps:	40/128 - (31%)

- Green bases have known domain annotations that are detailed below.

  Fly   146 NQLIHLNLEG---------------------NKLSTLGKGPILRSPS------------------ 171
            |.|..||..|                     |....|.|.|.|||.:
  Fly    90 NNLAALNQSGKLSRVQPALEMLLCGWPKDGLNHFRDLQKLPRLRSLTIEYSGFTEFKFDFPEMLE 154

  Fly   172 LRSLNLRNSQVNQLGTQLLSALPQLRQLDLAQNLLLTLSPGDFHAPRNLASLNVEENPFNCDR 234
            |.::|:..:.::.:.::....:..|:.|||..|.|:.|. |....|||...|.:..||:||.|
  Fly   155 LHTINISWTNLSYISSRTFKRVHPLKVLDLRWNQLIQLD-GPLLLPRNFEQLYLAGNPWNCTR 216

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.