Sequence 1: | NP_001285960.1 | Gene: | CG18480 / 34920 | FlyBaseID: | FBgn0028518 | Length: | 550 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001381943.1 | Gene: | Lrrc55 / 311171 | RGDID: | 1561726 | Length: | 311 | Species: | Rattus norvegicus |
Alignment Length: | 251 | Identity: | 68/251 - (27%) |
---|---|---|---|
Similarity: | 99/251 - (39%) | Gaps: | 40/251 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 CVTKPKM--------WLGLKQILLYVGLLLCVLLQVCRSKTQSQMFCPTVCHCDLHAQRNRAV-C 60
Fly 61 SAKRLISANIEIPTTVELLDLSYNDITTIDDDSFKTTIHLLNLTLAHNAIHTLYGDAFVELTRLR 125
Fly 126 YLDLSYNRLEQIDEHILESNNQLIHLNLEGNKLSTLGKGPILRSPSLRSLNLRNSQVNQLGTQLL 190
Fly 191 SALPQLRQLDLAQNLLLTLSPGDFHAPRNLASLNVEENPFNCDRALAKVATGLRQR 246 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG18480 | NP_001285960.1 | LRR_8 | 74..134 | CDD:290566 | 18/59 (31%) |
LRR_RI | <76..230 | CDD:238064 | 39/153 (25%) | ||
leucine-rich repeat | 76..99 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 100..123 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 122..182 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 124..147 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 148..171 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 170..230 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 172..195 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 196..219 | CDD:275380 | 8/22 (36%) | ||
Lrrc55 | NP_001381943.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |