DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18480 and Lrrc15

DIOPT Version :9

Sequence 1:NP_001285960.1 Gene:CG18480 / 34920 FlyBaseID:FBgn0028518 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_659551.1 Gene:Lrrc15 / 246296 RGDID:70551 Length:578 Species:Rattus norvegicus


Alignment Length:633 Identity:137/633 - (21%)
Similarity:221/633 - (34%) Gaps:208/633 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LKQILLYVGLLLCVLLQVCRSKTQSQMF--CPTVCHCDLHAQRNRAVCSAKRLISANIEIPTTVE 77
            ||..||        ||..|::......:  ||:.|.|   ::.::..|:..|:::....:|....
  Rat     3 LKHYLL--------LLVGCQAWALGLAYYGCPSECTC---SRASQVECTGARIVAMPTPLPWNAM 56

  Fly    78 LLDLSYNDITTIDDDSFKTTIHLLNLTLAHNAIHTLYGDAFVELTRLRYLDLSYNRLEQID---- 138
            .|.:....||.:.::.|.....|:.|.:..|.:.|:...||..|..||||.|:.|:|..:.    
  Rat    57 SLQVVNTHITELPENLFLNISALIALKMEKNELSTIMPGAFRNLGSLRYLSLANNKLRMLPIRVF 121

  Fly   139 ------EHILESNNQLI--------------HLNLEGNKLSTLGKGPILRSPSLRSLNL-RNS-- 180
                  |.:|.|||||:              .|.|.||.|.::.:........|..||| |||  
  Rat   122 QDVNNLESLLLSNNQLVQIQPAQFSQFSNLRELQLHGNNLESIPEEAFDHLVGLTKLNLGRNSFT 186

  Fly   181 -------------QVNQLGTQLLSALP--------QLRQLDLAQNLLLTLSPGDFHAPRNLASLN 224
                         ||.:|....||.:|        .|::|.|.:|.:.|||||.||..|||..|.
  Rat   187 HLSPRLFQHLGNLQVLRLHENRLSDIPMGTFDALGNLQELALQENQIGTLSPGLFHNNRNLQRLY 251

  Fly   225 VEEN--------------PFNCDRALAKVATGLRQRGVAIF--MSNCMEEEVQDHQDDAEAVN-F 272
            :..|              ..|   .|......||:....:|  |.|..|..:.::...:.|.| |
  Rat   252 LSNNHISQLPPGIFMQLPQLN---KLTLFGNSLRELSPGVFGPMPNLRELWLYNNHITSLADNTF 313

  Fly   273 PNKNE------KFESMEYLEPSTRGPQSVLSVWRDLDSSEEQNSSQDDE-----QMSSLSDVCEG 326
            .:.|:      ....:.|:.|   |..:.|:..|:|  |...|:.||.:     .:::|.::...
  Rat   314 SHLNQLQVLILSHNQLTYISP---GAFNGLTNLREL--SLHTNALQDLDSNVFRSLANLQNISLQ 373

  Fly   327 SREKLCLRYRICLERVSHELLAGGNS----QLED---EIIRTHTYDEDDLKLAFVVGGATGVCMV 384
            |..         |.::...:.|..|.    ||::   |.:....:|.                  
  Rat   374 SNR---------LRQLPGSIFANVNGLTTIQLQNNNLENLPLGIFDH------------------ 411

  Fly   385 IFIITFALCLKSCCEMRKKKSNPEVATGVSAPLNPSQDSLPTIHTW-SPQRTR-----NPRRSNP 443
                     |.:.||:|...:          |.....|.|| :|.| ...|.|     .|..|:|
  Rat   412 ---------LVNLCELRLYDN----------PWRCDSDILP-LHNWLLLNRARLGTDTLPVCSSP 456

  Fly   444 QRPRSTQSHAVVRQPY------GPQDNFVSRLFGRPARSQYYRTINQNTATLIRRLSRSNLFTSR 502
            ...|. ||..::...:      ||:         .|....|                        
  Rat   457 ANVRG-QSLVIININFPGPSVQGPE---------TPEVPSY------------------------ 487

  Fly   503 DREPSSPAEPPTSTARFYTDVIESGAIRPETPPPNYGDVVVIENCDNK 550
               |.:|:.|.|::....|::  :.|:      .:|.|:..||..|::
  Rat   488 ---PDTPSYPDTTSVSSTTEI--TSAV------DDYTDLTTIEATDDR 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18480NP_001285960.1 LRR_8 74..134 CDD:290566 17/59 (29%)
LRR_RI <76..230 CDD:238064 59/215 (27%)
leucine-rich repeat 76..99 CDD:275380 4/22 (18%)
leucine-rich repeat 100..123 CDD:275380 7/22 (32%)
LRR_8 122..182 CDD:290566 26/99 (26%)
leucine-rich repeat 124..147 CDD:275380 11/32 (34%)
leucine-rich repeat 148..171 CDD:275380 6/36 (17%)
LRR_8 170..230 CDD:290566 29/97 (30%)
leucine-rich repeat 172..195 CDD:275380 13/46 (28%)
leucine-rich repeat 196..219 CDD:275380 11/22 (50%)
Lrrc15NP_659551.1 LRR_8 54..113 CDD:290566 17/58 (29%)
LRR 1 54..75 4/20 (20%)
LRR 2 78..99 6/20 (30%)
leucine-rich repeat 79..102 CDD:275380 7/22 (32%)
LRR_RI <94..303 CDD:238064 59/211 (28%)
LRR_8 102..161 CDD:290566 18/58 (31%)
LRR 3 102..123 7/20 (35%)
leucine-rich repeat 103..126 CDD:275380 7/22 (32%)
LRR 4 126..147 7/20 (35%)
leucine-rich repeat 127..150 CDD:275380 7/22 (32%)
LRR_8 149..209 CDD:290566 15/59 (25%)
LRR 5 150..171 5/20 (25%)
leucine-rich repeat 151..174 CDD:275380 5/22 (23%)
LRR 6 174..195 7/20 (35%)
leucine-rich repeat 175..198 CDD:275380 7/22 (32%)
LRR_8 198..257 CDD:290566 22/58 (38%)
LRR 7 198..219 6/20 (30%)
leucine-rich repeat 199..222 CDD:275380 6/22 (27%)
LRR 8 222..243 10/20 (50%)
leucine-rich repeat 223..246 CDD:275380 11/22 (50%)
LRR_8 245..305 CDD:290566 13/62 (21%)
LRR 9 246..267 4/20 (20%)
leucine-rich repeat 247..270 CDD:275380 3/22 (14%)
LRR 10 270..291 5/23 (22%)
leucine-rich repeat 271..294 CDD:275380 6/25 (24%)
LRR_8 293..353 CDD:290566 14/64 (22%)
LRR 11 294..315 5/20 (25%)
leucine-rich repeat 295..318 CDD:275380 4/22 (18%)
LRR_4 318..358 CDD:289563 10/44 (23%)
LRR 12 318..339 3/23 (13%)
leucine-rich repeat 319..342 CDD:275380 4/25 (16%)
LRR 13 342..363 6/22 (27%)
leucine-rich repeat 343..364 CDD:275380 6/22 (27%)
LRR_8 366..424 CDD:290566 13/103 (13%)
LRR 14 366..387 3/29 (10%)
leucine-rich repeat 367..387 CDD:275380 3/28 (11%)
LRR 15 390..411 3/20 (15%)
leucine-rich repeat 391..412 CDD:275380 4/47 (9%)
TPKR_C2 423..>462 CDD:301599 12/50 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..500 8/59 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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