Sequence 1: | NP_001285960.1 | Gene: | CG18480 / 34920 | FlyBaseID: | FBgn0028518 | Length: | 550 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006499531.1 | Gene: | Lrrc55 / 241528 | MGIID: | 2685197 | Length: | 311 | Species: | Mus musculus |
Alignment Length: | 251 | Identity: | 68/251 - (27%) |
---|---|---|---|
Similarity: | 99/251 - (39%) | Gaps: | 40/251 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 CVTKPKM--------WLGLKQILLYVGLLLCVLLQVCRSKTQSQMFCPTVCHCDLHAQRNRAV-C 60
Fly 61 SAKRLISANIEIPTTVELLDLSYNDITTIDDDSFKTTIHLLNLTLAHNAIHTLYGDAFVELTRLR 125
Fly 126 YLDLSYNRLEQIDEHILESNNQLIHLNLEGNKLSTLGKGPILRSPSLRSLNLRNSQVNQLGTQLL 190
Fly 191 SALPQLRQLDLAQNLLLTLSPGDFHAPRNLASLNVEENPFNCDRALAKVATGLRQR 246 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG18480 | NP_001285960.1 | LRR_8 | 74..134 | CDD:290566 | 18/59 (31%) |
LRR_RI | <76..230 | CDD:238064 | 39/153 (25%) | ||
leucine-rich repeat | 76..99 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 100..123 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 122..182 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 124..147 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 148..171 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 170..230 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 172..195 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 196..219 | CDD:275380 | 8/22 (36%) | ||
Lrrc55 | XP_006499531.1 | LRRNT | 51..82 | CDD:214470 | 13/35 (37%) |
leucine-rich repeat | 60..79 | CDD:275380 | 7/18 (39%) | ||
leucine-rich repeat | 80..103 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 103..161 | CDD:338972 | 19/70 (27%) | ||
leucine-rich repeat | 104..127 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 128..151 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 151..210 | CDD:338972 | 19/81 (23%) | ||
leucine-rich repeat | 152..176 | CDD:275380 | 9/46 (20%) | ||
leucine-rich repeat | 177..200 | CDD:275380 | 8/22 (36%) | ||
TPKR_C2 | 209..260 | CDD:387596 | 6/19 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |