DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18480 and Chad

DIOPT Version :9

Sequence 1:NP_001285960.1 Gene:CG18480 / 34920 FlyBaseID:FBgn0028518 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_031715.1 Gene:Chad / 12643 MGIID:1096866 Length:358 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18480NP_001285960.1 LRR_8 74..134 CDD:290566
LRR_RI <76..230 CDD:238064
leucine-rich repeat 76..99 CDD:275380
leucine-rich repeat 100..123 CDD:275380
LRR_8 122..182 CDD:290566
leucine-rich repeat 124..147 CDD:275380
leucine-rich repeat 148..171 CDD:275380
LRR_8 170..230 CDD:290566
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..219 CDD:275380
ChadNP_031715.1 LRRNT 22..48 CDD:279764
LRR 1 51..72
leucine-rich repeat 52..75 CDD:275380
LRR_8 74..134 CDD:290566
LRR 2 75..96
leucine-rich repeat 76..99 CDD:275380
LRR_RI <89..281 CDD:238064
LRR 3 99..120
leucine-rich repeat 100..123 CDD:275380
LRR 4 123..144
leucine-rich repeat 124..147 CDD:275380
LRR_8 147..206 CDD:290566
LRR 5 147..168
leucine-rich repeat 148..171 CDD:275380
LRR 6 171..192
leucine-rich repeat 172..195 CDD:275380
LRR 7 195..216
leucine-rich repeat 196..219 CDD:275380
LRR 8 219..240
LRR_8 220..279 CDD:290566
leucine-rich repeat 220..243 CDD:275380
LRR 9 244..265
leucine-rich repeat 245..268 CDD:275380
LRR 10 268..289
leucine-rich repeat 269..291 CDD:275380
LRRCT 299..346 CDD:214507
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..358
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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