DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18480 and CHAD

DIOPT Version :10

Sequence 1:NP_609761.1 Gene:CG18480 / 34920 FlyBaseID:FBgn0028518 Length:550 Species:Drosophila melanogaster
Sequence 2:XP_054170751.1 Gene:CHAD / 1101 HGNCID:1909 Length:440 Species:Homo sapiens


Alignment Length:345 Identity:92/345 - (26%)
Similarity:140/345 - (40%) Gaps:65/345 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ILLYVGLLLCVLLQVCRSKTQSQMFCPTVCHCDLHAQRNRAVCSAKRLISANIEIPTTVE---LL 79
            :||.:|||..:|..:..        ||..|||  |:.....:|....|    .:||...|   ||
Human    87 LLLSLGLLAGLLPALAA--------CPQNCHC--HSDLQHVICDKVGL----QKIPKVSEKTKLL 137

  Fly    80 DLSYNDITTIDDDSFKTTIHLLNLTLAHNAIHTLYGDAFVELTRLRYLDLSYNRLEQIDEHILES 144
            :|..|:...:..:||:...:|::|.|.|..|..:...||..|.:|.||.||:|.:..:.....:.
Human   138 NLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDD 202

  Fly   145 NNQLIHLNLEGNKLSTLGKGPILRSP--SLRSLNLRNSQVNQLGTQLLSALPQLRQLDLAQNLLL 207
            ..:|.:|.|:.||::.|.:|  |.||  :|..|.|.|:::.:|..........||.|.|::|.|.
Human   203 LTELTYLYLDHNKVTELPRG--LLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALS 265

  Fly   208 TLSPG---------DFHAPRN---------LASLNVEE------NPFNC--DRALAKVATGLRQR 246
            :|.||         .||..||         |:.|.|.|      ||...  |.|.......|.  
Human   266 SLQPGALDDVENLAKFHVDRNQLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLE-- 328

  Fly   247 GVAIFMSNCMEEEVQD------------HQDDAEAVNFPNKNEKFESMEYLEPSTRGPQSVLSVW 299
              .:::.|...|:..|            |.::......|: |..|:|:|.| ..|..|.......
Human   329 --TLWLDNTNLEKFSDGAFLGVTTLKHVHLENNRLNQLPS-NFPFDSLETL-ALTNNPWKCTCQL 389

  Fly   300 RDLDSSEEQNSSQDDEQMSS 319
            |.|....|..:|:.|...:|
Human   390 RGLRRWLEAKASRPDATCAS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18480NP_609761.1 LRR <66..>230 CDD:443914 56/192 (29%)
leucine-rich repeat 76..99 CDD:275380 7/25 (28%)
leucine-rich repeat 100..123 CDD:275380 8/22 (36%)
leucine-rich repeat 124..147 CDD:275380 6/22 (27%)
leucine-rich repeat 148..171 CDD:275380 10/24 (42%)
leucine-rich repeat 172..195 CDD:275380 5/22 (23%)
leucine-rich repeat 196..219 CDD:275380 11/31 (35%)
CHADXP_054170751.1 LRRNT 104..130 CDD:396168 10/31 (32%)
LRR 131..>382 CDD:443914 69/258 (27%)
leucine-rich repeat 134..157 CDD:275380 6/22 (27%)
leucine-rich repeat 158..181 CDD:275380 8/22 (36%)
leucine-rich repeat 182..205 CDD:275380 6/22 (27%)
leucine-rich repeat 206..229 CDD:275380 10/24 (42%)
leucine-rich repeat 230..253 CDD:275380 5/22 (23%)
leucine-rich repeat 254..277 CDD:275380 9/22 (41%)
leucine-rich repeat 278..301 CDD:275380 6/22 (27%)
leucine-rich repeat 302..325 CDD:275380 5/22 (23%)
leucine-rich repeat 327..350 CDD:275380 4/26 (15%)
leucine-rich repeat 351..373 CDD:275380 4/22 (18%)
LRRCT 381..428 CDD:214507 7/29 (24%)

Return to query results.
Submit another query.