DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or35a and Or30a

DIOPT Version :9

Sequence 1:NP_723916.1 Gene:Or35a / 34918 FlyBaseID:FBgn0028946 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_523520.2 Gene:Or30a / 34236 FlyBaseID:FBgn0032096 Length:377 Species:Drosophila melanogaster


Alignment Length:437 Identity:76/437 - (17%)
Similarity:155/437 - (35%) Gaps:117/437 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VPRFADGQKVKLAWPLAVFRLNHIFWPLDPSTGKWGRYLDKVLAVAMSLVFMQHNDAELRYLRFE 69
            :|.|....|:...|       :::|      ...|.||:.....:.::..         :|:...
  Fly    11 MPIFGSTLKLMKFW-------SYLF------VHNWRRYVAMTPYIIINCT---------QYVDIY 53

  Fly    70 ASNRNLDAFLTGMPTYLILVEAQFRSLHILLHFEKLQKFLEIFYANIYIDPRKEPEMFRKVDGKM 134
            .|..:||..:..:...::......|.:.:.:.....::|:.|. .:.||      |:.:..|  .
  Fly    54 LSTESLDFIIRNVYLAVLFTNTVVRGVLLCVQRFSYERFINIL-KSFYI------ELLQSDD--P 109

  Fly   135 IINRLV-------------SAMYGAVISL-YLIAPVFSIINQSKDFLYSMIFP-FD----SDPLY 180
            |||.||             :.:.|....: ::..|:|   ...:...|.|..| .|    :.|.|
  Fly   110 IINILVKETTRLSVLISRINLLMGCCTCIGFVTYPIF---GSERVLPYGMYLPTIDEYKYASPYY 171

  Fly   181 ----------------IFVPLLLTNVWVGIVIDTMMFGETNLLCELIVHLNGSYMLLKRDLQLAI 229
                            :::|      :..:|:...:|  ..|:|.::.|...|...||.:     
  Fly   172 EIFFVIQAIMAPMGCCMYIP------YTNMVVTFTLF--AILMCRVLQHKLRSLEKLKNE----- 223

  Fly   230 EKILVARDRPHMAKQLKVLITKTLRKNVALNQFGQQLEAQYTVRVFIMFAFAAGLLCALSFK--- 291
                          |::..|...::..:.|:.|...:.|..|....:.|.....:||.|.|.   
  Fly   224 --------------QVRGEIIWCIKYQLKLSGFVDSMNALNTHLHLVEFLCFGAMLCVLLFSLII 274

  Fly   292 ----AYTNPMANYIYAIWFGAKTVELLSLGQIGSDLAFTTDSLSTMYYLTHWEQILQYSTNPSEN 352
                |.|..:..|:..|:  |.:|.|.   .:.::|.|.:..::...|.::|   :.:..:..:.
  Fly   275 AQTIAQTVIVIAYMVMIF--ANSVVLY---YVANELYFQSFDIAIAAYESNW---MDFDVDTQKT 331

  Fly   353 LRLLKLINLAIEMNSKPFYVTGLKYFRVSLQAGLKILQASFSYFTFL 399
            |:.|      |..:.||..:.....:.::|:....:|.|.:|:||.|
  Fly   332 LKFL------IMRSQKPLAILVGGTYPMNLKMLQSLLNAIYSFFTLL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or35aNP_723916.1 7tm_6 74..393 CDD:251636 62/360 (17%)
Or30aNP_523520.2 7tm_6 58..366 CDD:251636 62/360 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466147
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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