DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or35a and Or65c

DIOPT Version :10

Sequence 1:NP_723916.1 Gene:Or35a / 34918 FlyBaseID:FBgn0028946 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_729163.2 Gene:Or65c / 318013 FlyBaseID:FBgn0041623 Length:410 Species:Drosophila melanogaster


Alignment Length:311 Identity:60/311 - (19%)
Similarity:105/311 - (33%) Gaps:96/311 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GQKVKLAWPLA--------VFRLNHIFWPLDPSTGKWGRYLDKVL-AVAMSLVFMQHNDAELRYL 66
            |.||::...:|        .|::.:..|        :|..||:|: |:.....:.|.....:.|.
  Fly    84 GDKVQMGRDIAFIIGFFYIAFKIYYFQW--------YGDELDEVVEALETFHPWAQKGPGAVDYR 140

  Fly    67 RFEASNRNLDAFLTG-----MPTYLIL-------VEAQFRSLHILLHFEKLQKFLE-IFYANIYI 118
            ..:.....|..||..     :..:::|       |..|...||....|:..:|.:. |.:|.|| 
  Fly   141 TAKRWYFTLAFFLASSWLVFLCIFILLLITSPLWVHQQILPLHAAFPFQWHEKSIHPISHAFIY- 204

  Fly   119 DPRKEPEMFRKVDGKMIINRLVSAMYGAVISLYL-IAPVFSIINQSKDFLYSMIFPFDSDPLYIF 182
                   :|:..:....:..|| .:.|..:|:|: |.....::......|:.....::...|   
  Fly   205 -------LFQTWNVMYFLTWLV-CIEGLSVSIYVEITFAIEVLCLELRHLHQRCHGYEQLRL--- 258

  Fly   183 VPLLLTNVWVGIVIDTMMFGETNLLCEL---IVHL--------NGSYMLLKRDLQLAIEKILV-- 234
                                |||.|.:.   |||:        :|:.:     :|:.:...||  
  Fly   259 --------------------ETNRLVQFHQKIVHILDHTNKVFHGTLI-----MQMGVNFFLVSL 298

  Fly   235 -------ARDRPHMAKQLKVLITKTLRKNVALNQFGQQL--------EAQY 270
                   ||..|.:..|..||:...|......:.||..|        ||.|
  Fly   299 SVLEAMEARKDPKVVAQFAVLMLLALGHLSMWSYFGDLLSQKSLTISEAAY 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or35aNP_723916.1 7tm_6 74..393 CDD:251636 47/239 (20%)
Or65cNP_729163.2 7tm_6 87..399 CDD:251636 58/308 (19%)

Return to query results.
Submit another query.