DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or35a and Or2a

DIOPT Version :10

Sequence 1:NP_723916.1 Gene:Or35a / 34918 FlyBaseID:FBgn0028946 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_525046.1 Gene:Or2a / 31207 FlyBaseID:FBgn0023523 Length:397 Species:Drosophila melanogaster


Alignment Length:345 Identity:57/345 - (16%)
Similarity:139/345 - (40%) Gaps:64/345 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 ILVEAQFRSLHIL---LHFEKLQKFLEIFYANIYI--DPRKEPEMFRKVDGKMIINRLVSAMYGA 146
            |:...:|.:::::   ||  :::..|.:..|...:  ||.:...:.::|:       :....:..
  Fly    81 IVANLKFANVYMVRKQLH--EIRSLLRLMDARARLVGDPEEISALRKEVN-------IAQGTFRT 136

  Fly   147 VISLYLIAPVFS----IINQSKDFLYSMIFPFD---SDPLYIFVPLLLTNVW--VGIVIDTMMFG 202
            ..|:::.....|    ::...::.||...|..|   |...|:     |.|::  .|:::..:...
  Fly   137 FASIFVFGTTLSCVRVVVRPDRELLYPAWFGVDWMHSTRNYV-----LINIYQLFGLIVQAIQNC 196

  Fly   203 ETN-----LLCELIVHLNGSYMLLKRDLQLAIEKILVARDRPHMAKQLKVL-------ITKTLRK 255
            .::     .||.|..|:        |.|:|.:.:|....::.:..:..:..       :.:.:|.
  Fly   197 ASDSYPPAFLCLLTGHM--------RALELRVRRIGCRTEKSNKGQTYEAWREEVYQELIECIRD 253

  Fly   256 NVALNQFGQQLEAQYTVRVFIMFAFAAGLLCALSFK-AYT----NPMANYIYAIWFGAKTVELLS 315
            ...:::..:.::...:|.....|..:|.:.|.::.. .|.    :..|..|..::|.|.|:|:..
  Fly   254 LARVHRLREIIQRVLSVPCMAQFVCSAAVQCTVAMHFLYVADDHDHTAMIISIVFFSAVTLEVFV 318

  Fly   316 LGQIGSDLAFTTDSLSTMYYLTHW-EQILQYSTNPSENLRLLKLINLAIEMNSKPFYVTGLKYFR 379
            :...|..:...:::|...:|..:| ||:      |.....||    ..:....:|..:....|..
  Fly   319 ICYFGDRMRTQSEALCDAFYDCNWIEQL------PKFKRELL----FTLARTQRPSLIYAGNYIA 373

  Fly   380 VSLQAGLKILQASFSYFTFL 399
            :||:...::::.::|.||.|
  Fly   374 LSLETFEQVMRFTYSVFTLL 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or35aNP_723916.1 7tm_6 74..393 CDD:251636 53/337 (16%)
Or2aNP_525046.1 7tm_6 66..387 CDD:251636 53/337 (16%)

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