DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15253 and Mep1b

DIOPT Version :10

Sequence 1:NP_609758.1 Gene:CG15253 / 34916 FlyBaseID:FBgn0028948 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001420342.1 Gene:Mep1b / 25727 RGDID:3081 Length:715 Species:Rattus norvegicus


Alignment Length:223 Identity:83/223 - (37%)
Similarity:124/223 - (55%) Gaps:7/223 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ETDPELTAGYIEGDMVPSGSSRNIWRNETYRWPNRIIYYHINSYIDEEHRNHIVSAIQKIESISC 90
            :.:.:|.....|||:....|.||....:.||||:.|.|. :...::...:..|::|.::....:|
  Rat    52 DINEDLGLDLFEGDIKLEASGRNSIIGDNYRWPHTIPYV-LEDSLEMNAKGVILNAFERYRLKTC 115

  Fly    91 LTFKEATTDQKYYVNVTSEEGGCFSYIGYLNRVQQLNLQNNEIGVGCFRLYTIVHEFLHALGFFH 155
            :.||..:.::. |::| .:..||:|.:|.::    ...|...||..|.|:.|:.|||||||||:|
  Rat   116 IDFKPWSGEEN-YISV-FKGSGCWSSVGNIH----AGKQELSIGTNCDRIATVQHEFLHALGFWH 174

  Fly   156 QQSAADRDDYVQIVEENITEGMEFNFDKYTEETVNDFGEKYDYGSVMHYGPYAFSKNGERTILAL 220
            :||.||||||:.||.:.|..|.|.||:.|.:...:.....|||.|||||...||....|.||:..
  Rat   175 EQSRADRDDYITIVWDRILSGKEHNFNIYNDSVSDSLNVPYDYTSVMHYSKTAFQNGTESTIITK 239

  Fly   221 EEGKEDVIGQRLELSETDIRKLNAIYKC 248
            ....|||||||::.|:.|:.|||.:|.|
  Rat   240 ISDFEDVIGQRMDFSDYDLLKLNQLYSC 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15253NP_609758.1 ZnMc_astacin_like 59..246 CDD:239807 70/186 (38%)
Mep1bNP_001420342.1 ZnMc 41..267 CDD:469599 82/221 (37%)
MAM 277..440 CDD:459878
MATH 439..597 CDD:445786
EGF_CA 620..658 CDD:238011
Blue background indicates that the domain is not in the aligned region.

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