DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15253 and hch-1

DIOPT Version :10

Sequence 1:NP_609758.1 Gene:CG15253 / 34916 FlyBaseID:FBgn0028948 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_510440.1 Gene:hch-1 / 181564 WormBaseID:WBGene00001828 Length:605 Species:Caenorhabditis elegans


Alignment Length:262 Identity:82/262 - (31%)
Similarity:121/262 - (46%) Gaps:52/262 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RIETDPELTAGYIEGDMVPSGSSRNI---------W-----RNE---------------TYRWPN 59
            :||:.|:......|||||.:....::         |     .||               :.||..
 Worm    72 KIESKPDEIPYLFEGDMVLTDEQMDLIIKNVRDQYWARKSSTNEFLYAIRGKRSMTSFLSERWSF 136

  Fly    60 RIIYYHINSYIDEE---HRNHIVSAIQKIESISCLTFKEATTDQKYYVNVTSEE-------GGCF 114
            .:.|     |||..   :.|.:::.:.|.|..:|..|    |....|.:.:.:.       .||:
 Worm   137 PVPY-----YIDTSSGVNTNAVLAGVAKWEQETCARF----TRLNSYSSSSRQNALRFISGNGCY 192

  Fly   115 SYIGYLNRVQQLNLQNNEIGVGCFRLYTIVHEFLHALGFFHQQSAADRDDYVQIVEENITEGMEF 179
            |.||.::|..    |:..||.||..|.|:.||..|||||:|:|:..||||||.|:.:||.:....
 Worm   193 SNIGKVSRFP----QDVSIGWGCTSLGTVCHEIGHALGFYHEQARYDRDDYVSILTQNIQDMYLS 253

  Fly   180 NFDKYTEETVNDFGEKYDYGSVMHYGPYAFSKNGERTILALEEGKEDVIGQRLELSETDIRKLNA 244
            .|.|.:..::.|:|..|||||||||...|||..|..||...:...:..||||:..|..|::::|.
 Worm   254 QFTKQSASSMVDYGVGYDYGSVMHYDQAAFSSTGGNTIATRDPNFQATIGQRVAPSFADVKRINF 318

  Fly   245 IY 246
            .|
 Worm   319 AY 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15253NP_609758.1 ZnMc_astacin_like 59..246 CDD:239807 68/196 (35%)
hch-1NP_510440.1 Astacin 132..323 CDD:426242 71/202 (35%)
CUB 386..466 CDD:214483
TSP1 533..565 CDD:214559
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.