DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15253 and hch-1

DIOPT Version :9

Sequence 1:NP_609758.1 Gene:CG15253 / 34916 FlyBaseID:FBgn0028948 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_510440.1 Gene:hch-1 / 181564 WormBaseID:WBGene00001828 Length:605 Species:Caenorhabditis elegans


Alignment Length:262 Identity:82/262 - (31%)
Similarity:121/262 - (46%) Gaps:52/262 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RIETDPELTAGYIEGDMVPSGSSRNI---------W-----RNE---------------TYRWPN 59
            :||:.|:......|||||.:....::         |     .||               :.||..
 Worm    72 KIESKPDEIPYLFEGDMVLTDEQMDLIIKNVRDQYWARKSSTNEFLYAIRGKRSMTSFLSERWSF 136

  Fly    60 RIIYYHINSYIDEE---HRNHIVSAIQKIESISCLTFKEATTDQKYYVNVTSEE-------GGCF 114
            .:.|     |||..   :.|.:::.:.|.|..:|..|    |....|.:.:.:.       .||:
 Worm   137 PVPY-----YIDTSSGVNTNAVLAGVAKWEQETCARF----TRLNSYSSSSRQNALRFISGNGCY 192

  Fly   115 SYIGYLNRVQQLNLQNNEIGVGCFRLYTIVHEFLHALGFFHQQSAADRDDYVQIVEENITEGMEF 179
            |.||.::|..    |:..||.||..|.|:.||..|||||:|:|:..||||||.|:.:||.:....
 Worm   193 SNIGKVSRFP----QDVSIGWGCTSLGTVCHEIGHALGFYHEQARYDRDDYVSILTQNIQDMYLS 253

  Fly   180 NFDKYTEETVNDFGEKYDYGSVMHYGPYAFSKNGERTILALEEGKEDVIGQRLELSETDIRKLNA 244
            .|.|.:..::.|:|..|||||||||...|||..|..||...:...:..||||:..|..|::::|.
 Worm   254 QFTKQSASSMVDYGVGYDYGSVMHYDQAAFSSTGGNTIATRDPNFQATIGQRVAPSFADVKRINF 318

  Fly   245 IY 246
            .|
 Worm   319 AY 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15253NP_609758.1 Astacin 55..250 CDD:279708 71/202 (35%)
ZnMc_astacin_like 59..246 CDD:239807 68/196 (35%)
hch-1NP_510440.1 Astacin 132..323 CDD:279708 71/202 (35%)
ZnMc_astacin_like 135..320 CDD:239807 68/197 (35%)
CUB 386..466 CDD:214483
TSP1 533..565 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10127
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.