DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15254 and Semp1

DIOPT Version :10

Sequence 1:NP_609757.1 Gene:CG15254 / 34915 FlyBaseID:FBgn0028949 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster


Alignment Length:250 Identity:121/250 - (48%)
Similarity:157/250 - (62%) Gaps:11/250 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VIFLASSCSAAPTTQNRIETDPELTAGYIEGDMVPSP-EGRNGLRNETFRWPNRIVYYYINRDID 73
            ||||.:     ||..:.:..||||.||:.:||:...| ..|||:.|:.:.||||.|.|.|..|..
  Fly     8 VIFLFT-----PTVFSELFKDPELLAGFYQGDIKAHPIRTRNGIVNQIYHWPNRTVPYMIEDDAF 67

  Fly    74 TE-HRNHILRGIRIIEQSSCLVFKEAT-TDQEYYVNVTSEAGGCYS-YVGYRNRVQQLNLQTYAL 135
            .: |...|||.|.|||::||::||.|| .|....:.:||:..||.: ::||||:.|.:||:.|.|
  Fly    68 ADSHYREILRAISIIEENSCVIFKPATEMDFPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPL 132

  Fly   136 DTGCFRLGTIVHEFLHALGFYHQQSTWNRDDYVRIAEENITEGTEGNFNKYDNETV-EDYGEPYD 199
            ..||||:|:|:||.||.|||.||..:.|||.||.|..:||......||...||.|. .|:.|.||
  Fly   133 GEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYD 197

  Fly   200 YSSVLHYTAYAFSKNGEMTIVPLQEGAEELMGQRLQMTQSDINKLNVMYKCPRQV 254
            |.||:||...|||:||:.|||||:||||. ||||..|::.||.|||.||:||..|
  Fly   198 YESVMHYVPRAFSRNGQPTIVPLREGAEN-MGQRFYMSEKDIRKLNKMYRCPDHV 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15254NP_609757.1 ZnMc_astacin_like 61..248 CDD:239807 95/190 (50%)
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 95/190 (50%)

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