DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15254 and Mep1b

DIOPT Version :10

Sequence 1:NP_609757.1 Gene:CG15254 / 34915 FlyBaseID:FBgn0028949 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001420342.1 Gene:Mep1b / 25727 RGDID:3081 Length:715 Species:Rattus norvegicus


Alignment Length:231 Identity:79/231 - (34%)
Similarity:124/231 - (53%) Gaps:15/231 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 QNRIETDPELTAGYIEGDMVPSPEGRNGLRNETFRWPNRIVYYYINRDIDTEHRNHILRGIRIIE 88
            |:..:.:.:|.....|||:.....|||.:..:.:|||:.|. |.:...::...:..||.......
  Rat    48 QDIFDINEDLGLDLFEGDIKLEASGRNSIIGDNYRWPHTIP-YVLEDSLEMNAKGVILNAFERYR 111

  Fly    89 QSSCLVFKEATTDQEYYVNVTSEAGGCYSYVGYRNRVQQLNL----QTYALDTGCFRLGTIVHEF 149
            ..:|:.|| ..:.:|.|::| .:..||:|.||        |:    |..::.|.|.|:.|:.|||
  Rat   112 LKTCIDFK-PWSGEENYISV-FKGSGCWSSVG--------NIHAGKQELSIGTNCDRIATVQHEF 166

  Fly   150 LHALGFYHQQSTWNRDDYVRIAEENITEGTEGNFNKYDNETVEDYGEPYDYSSVLHYTAYAFSKN 214
            ||||||:|:||..:||||:.|..:.|..|.|.|||.|::...:....||||:||:||:..||...
  Rat   167 LHALGFWHEQSRADRDDYITIVWDRILSGKEHNFNIYNDSVSDSLNVPYDYTSVMHYSKTAFQNG 231

  Fly   215 GEMTIVPLQEGAEELMGQRLQMTQSDINKLNVMYKC 250
            .|.||:......|:::|||:..:..|:.|||.:|.|
  Rat   232 TESTIITKISDFEDVIGQRMDFSDYDLLKLNQLYSC 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15254NP_609757.1 ZnMc_astacin_like 61..248 CDD:239807 66/190 (35%)
Mep1bNP_001420342.1 ZnMc 41..267 CDD:469599 78/229 (34%)
MAM 277..440 CDD:459878
MATH 439..597 CDD:445786
EGF_CA 620..658 CDD:238011
Blue background indicates that the domain is not in the aligned region.

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