DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and astl2c

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001037864.1 Gene:astl2c / 594901 XenbaseID:XB-GENE-6449741 Length:496 Species:Xenopus tropicalis


Alignment Length:248 Identity:82/248 - (33%)
Similarity:122/248 - (49%) Gaps:40/248 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VFSELFKDPELLAGFY-QGDIKAHPI-------------RTRNGIVNQIYHWPNRTVPYMIEDDA 66
            ||..:.:..:....|: |||| ||..             :..|||||         |||.|..| 
 Frog    43 VFGRILRANKGKRNFHVQGDI-AHKFSRSAINCKECLWPKDSNGIVN---------VPYTISSD- 96

  Fly    67 FADSHYREILRAISIIEENSCVIFKPATEMDFPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYP 131
            ::.:....|:.|:......:||.|.|.|:.|..:|:....   ||.: ::|.....|.|:     
 Frog    97 YSQNEASLIMAAMQEFATLTCVQFIPQTDEDDYIAIQPLD---GCWS-YIGVNGGAQQVS----- 152

  Fly   132 LGE-GCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEG 195
            ||: ||...|.|.|||.|||||.|:|...:||.||.|.::.|:|. ||.|.:..::   .:....
 Frog   153 LGKGGCIYYGVIQHELNHVLGFVHEHSRSDRDNYVHINYQYISPD-NIAFFDKKDT---DNLGLE 213

  Fly   196 YDYESVMHYVPRAFSR-NGQPTIVPLREGAENMGQRFYMSEKDIRKLNKMYRC 247
            |||.|||||...::|. .|:.||||:......:|||:.:|..|:.|:|::|:|
 Frog   214 YDYSSVMHYPGYSYSNTTGKNTIVPIPNANVPIGQRYGLSTLDVSKINRLYQC 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 66/191 (35%)
astl2cNP_001037864.1 ZnMc_hatching_enzyme 84..266 CDD:239810 72/204 (35%)
CUB 270..380 CDD:238001
CUB 383..495 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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