DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Semp1 and bmp1a

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001035126.1 Gene:bmp1a / 572452 ZFINID:ZDB-GENE-060818-1 Length:986 Species:Danio rerio


Alignment Length:202 Identity:67/202 - (33%)
Similarity:108/202 - (53%) Gaps:17/202 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 WPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIF-KPATEMDFPMALVITSKGLGCNTVHL 116
            ||...:||:|..: |:.|......:|:...|:::||.| :..||..:   :|.|.:..||.: ::
Zfish   119 WPEGVIPYVISGN-FSGSQRAIFRQAMRHWEKHTCVTFIERTTEESY---IVFTYRPCGCCS-YV 178

  Fly   117 GYR-NKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINF 180
            |.| ...|.::     :|:.|.:.|.::|||.||:||.|:|...:||::|||...||.|....||
Zfish   179 GRRGGGPQAIS-----IGKNCDKFGIVVHELGHVIGFWHEHTRPDRDEHVSIIRDNIQPGQEYNF 238

  Fly   181 VNNDNSTAWHDFDEGYDYESVMHYVPRAFSRN-GQPTIVPLRE--GAE-NMGQRFYMSEKDIRKL 241
            :..:.... ....|.||::|:|||....|||. ...||:|..:  |.. .:|||..:|:.||.:.
Zfish   239 LKMEPGEV-DSLGEVYDFDSIMHYARNTFSRGIFLDTILPRYDVNGVRPPIGQRTRLSKGDIAQA 302

  Fly   242 NKMYRCP 248
            .|:|:||
Zfish   303 RKLYKCP 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 62/195 (32%)
bmp1aNP_001035126.1 ZnMc_BMP1_TLD 112..309 CDD:239808 65/200 (33%)
CUB 311..420 CDD:395345
CUB 424..533 CDD:395345
FXa_inhibition 544..576 CDD:464251
CUB 580..699 CDD:395345
FXa_inhibition 706..741 CDD:464251
CUB 746..855 CDD:395345
CUB 859..972 CDD:395345
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.