DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and bmp1b

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_005155463.1 Gene:bmp1b / 559877 ZFINID:ZDB-GENE-060818-2 Length:970 Species:Danio rerio


Alignment Length:205 Identity:68/205 - (33%)
Similarity:109/205 - (53%) Gaps:23/205 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 WPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIF-KPATEMDFPMALVITSKGLGCNTVHL 116
            |||..:||:|..: |..|......:|:...|:::||.| :.:.|..:   :|.|.:..||.: .:
Zfish   113 WPNGIIPYIISGN-FTGSQRAIFKQAMRHWEKHTCVTFVERSVEESY---IVFTLRPCGCCS-FV 172

  Fly   117 GYR-NKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINF 180
            |.| ...|.::     :|:.|.:.|.::|||.||:||.|:|...:||::|.|..:||.|....||
Zfish   173 GRRGGGPQAIS-----IGKNCDKFGIVVHELGHVIGFWHEHTRPDRDEHVDIFRENIQPGQEYNF 232

  Fly   181 VNNDNSTAWHDFD---EGYDYESVMHYVPRAFSRN-GQPTIVPLR--EGAE-NMGQRFYMSEKDI 238
            :..:..    |.|   |.||::|:|||....|||. ...|::|..  :|.. .:|||..:|:.||
Zfish   233 IKMEPD----DVDSLGEVYDFDSIMHYARNTFSRGIYLDTMLPKYDVDGVRPPIGQRTRLSKGDI 293

  Fly   239 RKLNKMYRCP 248
            .:..|:||||
Zfish   294 AQARKLYRCP 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 62/198 (31%)
bmp1bXP_005155463.1 ZnMc_BMP1_TLD 109..303 CDD:239808 66/203 (33%)
CUB 305..414 CDD:395345
CUB 418..527 CDD:395345
FXa_inhibition 538..570 CDD:464251
CUB 575..684 CDD:395345
FXa_inhibition 691..726 CDD:464251
CUB 731..840 CDD:395345
CUB 844..957 CDD:395345
Blue background indicates that the domain is not in the aligned region.

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