DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and bmp1b

DIOPT Version :9

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_005155463.1 Gene:bmp1b / 559877 ZFINID:ZDB-GENE-060818-2 Length:970 Species:Danio rerio


Alignment Length:205 Identity:68/205 - (33%)
Similarity:109/205 - (53%) Gaps:23/205 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 WPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIF-KPATEMDFPMALVITSKGLGCNTVHL 116
            |||..:||:|..: |..|......:|:...|:::||.| :.:.|..:   :|.|.:..||.: .:
Zfish   113 WPNGIIPYIISGN-FTGSQRAIFKQAMRHWEKHTCVTFVERSVEESY---IVFTLRPCGCCS-FV 172

  Fly   117 GYR-NKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINF 180
            |.| ...|.::     :|:.|.:.|.::|||.||:||.|:|...:||::|.|..:||.|....||
Zfish   173 GRRGGGPQAIS-----IGKNCDKFGIVVHELGHVIGFWHEHTRPDRDEHVDIFRENIQPGQEYNF 232

  Fly   181 VNNDNSTAWHDFD---EGYDYESVMHYVPRAFSRN-GQPTIVPLR--EGAE-NMGQRFYMSEKDI 238
            :..:..    |.|   |.||::|:|||....|||. ...|::|..  :|.. .:|||..:|:.||
Zfish   233 IKMEPD----DVDSLGEVYDFDSIMHYARNTFSRGIYLDTMLPKYDVDGVRPPIGQRTRLSKGDI 293

  Fly   239 RKLNKMYRCP 248
            .:..|:||||
Zfish   294 AQARKLYRCP 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 Astacin 53..249 CDD:279708 68/205 (33%)
ZnMc_astacin_like 55..245 CDD:239807 62/198 (31%)
bmp1bXP_005155463.1 ZnMc_BMP1_TLD 109..303 CDD:239808 66/203 (33%)
Astacin 111..303 CDD:279708 66/203 (33%)
CUB 305..414 CDD:278839
CUB 418..527 CDD:278839
EGF_CA 530..570 CDD:214542
CUB 575..684 CDD:278839
FXa_inhibition 691..726 CDD:291342
CUB 731..840 CDD:278839
CUB 844..957 CDD:278839
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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