DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and cuzd1.2

DIOPT Version :9

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:XP_021323075.1 Gene:cuzd1.2 / 555768 ZFINID:ZDB-GENE-131119-30 Length:718 Species:Danio rerio


Alignment Length:124 Identity:26/124 - (20%)
Similarity:45/124 - (36%) Gaps:21/124 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 FRIGSIIHELLHVLGFEHQHVSQNRD-QYVSI---QWKNINPQYNINFVNNDNSTAWHDFDEGYD 197
            |...:..|..::..|::....|..|| .|..|   .:.:..|.|.   ...|::|..| :.|.:.
Zfish   268 FEPDTTAHSCMYNCGYDLGSCSCARDCHYYDICCPDYDSHCPSYT---TLRDSTTELH-YTESHP 328

  Fly   198 YESVMHYVPRAFSRNGQPTIVPLREGA-------ENMGQRFYMSEKDIRKLNKMYRCPD 249
            ......|....||....|:.  ..:.|       ...|||.:::..|:    ::.||.|
Zfish   329 KCGGHLYGAGLFSTPNYPSY--YHDNAYCVWYLSAQQGQRIFLTFADV----QLERCCD 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 Astacin 53..249 CDD:279708 25/122 (20%)
ZnMc_astacin_like 55..245 CDD:239807 23/118 (19%)
cuzd1.2XP_021323075.1 CUB 21..127 CDD:238001
Somatomedin_B 131..164 CDD:307259
Somatomedin_B 175..214 CDD:321959
Somatomedin_B <239..260 CDD:307259
CUB 330..439 CDD:238001 12/58 (21%)
ZP 450..694 CDD:214579
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3714
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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