DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and tll1

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_571085.1 Gene:tll1 / 474335 ZFINID:ZDB-GENE-041020-1 Length:1022 Species:Danio rerio


Alignment Length:223 Identity:74/223 - (33%)
Similarity:116/223 - (52%) Gaps:23/223 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DIKAHPIRTRNGIVNQIYHWPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIFKPATEMDF 98
            ::|:...|.......:|  ||...:||:|..: |..|....:.:|:...|:.:||.|...|  |.
Zfish   149 NVKSRVPRAATSRAEKI--WPGGVIPYVIGGN-FTGSQRAMLKQAMRHWEKQTCVTFIEKT--DE 208

  Fly    99 PMALVITSKGLGCNTVHLGYR-NKTQVVNLEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRD 162
            ...:|.|.:..||.: ::|.| |..|.::     :|:.|.:.|.::|||.||:||.|:|...:||
Zfish   209 ESYIVFTYRPCGCCS-YVGRRGNGPQAIS-----IGKNCDKFGIVVHELGHVIGFWHEHTRPDRD 267

  Fly   163 QYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYDYESVMHYVPRAFSRNGQ--PTIVPLREGAE 225
            .:|:|...||.|....||:..:.... :...|.||::|:|||....||| |.  .||:|.|:  |
Zfish   268 DHVTIIRDNIQPGQEYNFIKMEPGDV-NSLGEPYDFDSIMHYARNTFSR-GMFLDTILPSRD--E 328

  Fly   226 N-----MGQRFYMSEKDIRKLNKMYRCP 248
            |     :|||..:|:.||.:..|:||||
Zfish   329 NGVRPAIGQRTRLSKGDISQAKKLYRCP 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 65/197 (33%)
tll1NP_571085.1 ZnMc_BMP1_TLD 157..356 CDD:239808 70/213 (33%)
CUB 358..467 CDD:395345
CUB 471..580 CDD:395345
FXa_inhibition 591..623 CDD:464251
CUB 627..736 CDD:395345
FXa_inhibition 743..778 CDD:464251
CUB 783..892 CDD:395345
CUB 896..1009 CDD:395345
Blue background indicates that the domain is not in the aligned region.

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