DRSC/TRiP Functional Genomics Resources

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Protein Alignment Semp1 and nas-39

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_001360030.1 Gene:nas-39 / 3565986 WormBaseID:WBGene00003555 Length:928 Species:Caenorhabditis elegans


Alignment Length:256 Identity:78/256 - (30%)
Similarity:121/256 - (47%) Gaps:28/256 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IWGVIFLFTPTVFSELFKDPELLAGFYQ-GDIKAHPIRTRNGIVNQIYH------WPNRTVPYMI 62
            |..:||||....|        :|..|.: ||::.......||.|::...      ||...:|::|
 Worm    10 IVNIIFLFIVVEF--------VLPTFIRSGDVRFRRYYRNNGRVSRAATAKKERIWPEGIIPFVI 66

  Fly    63 EDDAFADSHYREILRAISIIEENSCVIFKPATEMDFPMALVITSKGLGCNTVHLGYRNK-TQVVN 126
            ..: |:..|....|||:...|..:||.|.| .:......:..|....||.: ::|.|.: .|.::
 Worm    67 ASN-FSGEHQHLFLRAMRHWENFTCVSFVP-RQPHHKHYITFTVDKCGCCS-YVGRRGEGPQAIS 128

  Fly   127 LEIYPLGEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHD 191
                 :|:.|.:.|.::|||.||:||.|:|...:||.||.|.:|:|....:.||..:..... ..
 Worm   129 -----IGKNCDKFGIVVHELGHVVGFWHEHTRPDRDMYVDIFYKSIQTGQDYNFEKSKPEEV-DS 187

  Fly   192 FDEGYDYESVMHYVPRAFSRNG-QPTIVPLREGAENM--GQRFYMSEKDIRKLNKMYRCPD 249
            ..|.||:.|:|||....|||.. ..||:|.......:  |||..:||.|||:..|:|:|.:
 Worm   188 LGEPYDFSSIMHYARDTFSRGAFYDTILPKPNSGFRLEIGQRVQLSEGDIRQTKKLYKCAE 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 61/193 (32%)
nas-39NP_001360030.1 ZnMc_BMP1_TLD 48..247 CDD:239808 64/207 (31%)
CUB 268..343 CDD:214483
CUB 359..474 CDD:238001
FXa_inhibition 480..515 CDD:464251
CUB 519..622 CDD:395345
FXa_inhibition 629..664 CDD:464251
CUB 669..780 CDD:238001
CUB 782..898 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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