DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Semp1 and CG15254

DIOPT Version :10

Sequence 1:NP_609756.1 Gene:Semp1 / 34914 FlyBaseID:FBgn0028944 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_609757.1 Gene:CG15254 / 34915 FlyBaseID:FBgn0028949 Length:254 Species:Drosophila melanogaster


Alignment Length:250 Identity:121/250 - (48%)
Similarity:157/250 - (62%) Gaps:11/250 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VIFLFT-----PTVFSELFKDPELLAGFYQGDIKAHPIRTRNGIVNQIYHWPNRTVPYMIEDDAF 67
            ||||.:     ||..:.:..||||.||:.:||:...| ..|||:.|:.:.||||.|.|.|..|..
  Fly    10 VIFLASSCSAAPTTQNRIETDPELTAGYIEGDMVPSP-EGRNGLRNETFRWPNRIVYYYINRDID 73

  Fly    68 ADSHYREILRAISIIEENSCVIFKPATEMDFPMALVITSKGLGCNTVHLGYRNKTQVVNLEIYPL 132
            .: |...|||.|.|||::||::||.|| .|....:.:||:..||.: ::||||:.|.:||:.|.|
  Fly    74 TE-HRNHILRGIRIIEQSSCLVFKEAT-TDQEYYVNVTSEAGGCYS-YVGYRNRVQQLNLQTYAL 135

  Fly   133 GEGCFRIGSIIHELLHVLGFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYD 197
            ..||||:|:|:||.||.|||.||..:.|||.||.|..:||......||...||.|. .|:.|.||
  Fly   136 DTGCFRLGTIVHEFLHALGFYHQQSTWNRDDYVRIAEENITEGTEGNFNKYDNETV-EDYGEPYD 199

  Fly   198 YESVMHYVPRAFSRNGQPTIVPLREGAEN-MGQRFYMSEKDIRKLNKMYRCPDHV 251
            |.||:||...|||:||:.|||||:||||. ||||..|::.||.|||.||:||..|
  Fly   200 YSSVLHYTAYAFSKNGEMTIVPLQEGAEELMGQRLQMTQSDINKLNVMYKCPRQV 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Semp1NP_609756.1 ZnMc_astacin_like 55..245 CDD:239807 95/190 (50%)
CG15254NP_609757.1 ZnMc_astacin_like 61..248 CDD:239807 95/190 (50%)

Return to query results.
Submit another query.